G2294692 (LOC106594721)


Basic Information

Item Value
gene id G2294692
gene name LOC106594721
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9729576 ~ 9774800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624691
CCCTGCGCGGGGTTGTGTGTTGGTGTTGGGGAAACAGGCAGAGCCAAATGGCTTGTTGAAGTCAGGTATAGTCTGGTGGGTGGGGTCAGAGTGATACAGGGGCGTGgctaacactgtagacacacccCCATCAGGGCTGTTGCTTCGAGATGGGTCAGATACCTCGGCTGCCTTGGCTGCAGCATTGTACTGTTTACAGTGGGCACAGCCCATATTAACCACAGAGACTATCGCTgctgtcttcctctgtcaaatCATCTGTCAGTCAACATtgccaCGGAGAGCACGAAGGGTCGTCAGTTATTCGCGCGGGCTGGCGGAGAGAGGTGTGAACAGCAACAGGGAGTTCCAGGCGCACGGGACAGAACGGGATGAGACCGTGGCTCGCGGAGCGCTCCTCTAGAGGGGATGTGAACGTGAGGCGCTCTCTCTTTGTCCGGAAGGGTTGGATTGACTGACACGCGCACTGACTGACGTCCACTCCGAAGCGCGCACCCTGGATGTGCTTGTGTTTTAACCGGAAAAATAGAAATCTGGTTTACGTGATTCATGTAGAAATTGTTCAAACGCAAAGTCCGGTGATTTGACAAAACCGCTGAGCCCGGGAATAGAACCGCTGGGCCTGTCCCAACCAGGTAGTCCCTTCCTACTATCCTGCTAGAGAGacacatatgtttcccatgcaaatAAAGCCCTCGAGTTG

Function

NR:

description
proto-oncogene tyrosine-protein kinase Yrk-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624691 True 703 lncRNA 0.54 3 9729576 9774800

Neighbor

gene id symbol gene type direction distance location
LOC110487884 LOC106570642 coding upstream 104881 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 155796 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 196914 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 299888 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 343232 9382727 ~ 9386344 (+)
LOC110487893 LOC106570636 coding downstream 274396 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 316503 10091303 ~ 10092528 (+)
LOC118946540 NA coding downstream 547233 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 629572 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 662877 10437677 ~ 10441669 (+)
G2294691 NA non-coding upstream 6492 9721268 ~ 9723084 (+)
G2294690 NA non-coding upstream 18035 9710997 ~ 9711541 (+)
G2294665 NA non-coding upstream 94045 9635143 ~ 9635531 (+)
G2294605 NA non-coding upstream 96526 9630217 ~ 9633050 (+)
G2294599 NA non-coding upstream 99477 9628203 ~ 9630099 (+)
G2294753 NA non-coding downstream 5209 9780009 ~ 9780239 (+)
G2294773 NA non-coding downstream 9792 9784592 ~ 9785260 (+)
G2294775 NA non-coding downstream 12120 9786920 ~ 9787137 (+)
G2294776 NA non-coding downstream 12486 9787286 ~ 9787497 (+)
G2294778 NA non-coding downstream 17561 9792361 ~ 9793850 (+)
G2294452 LOC106570648 other upstream 391821 9335335 ~ 9337755 (+)
G2294081 NA other upstream 626390 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 882324 8844013 ~ 8847252 (+)
G2293942 NA other upstream 934074 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1217835 8510872 ~ 8511770 (+)
G2294925 NA other downstream 355316 10130116 ~ 10131651 (+)
LOC110487904 snrpd1 other downstream 740154 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1510693 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1788747 11563547 ~ 11564590 (+)

Expression


Co-expression Network