G2294778


Basic Information

Item Value
gene id G2294778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9792361 ~ 9793850 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624800
ACAATTTGAATAATTTTATTAGGCCTATATGGTCTAAAAAGGAAGGAAAATACAATCACGAGGATCCACTTTTATAGACAATATAACGGCGCACAGACAGCGCATTGCACAAACAAAACAACCCTCACAATATCAAATGGAATTATTGTACATGGGTCTATTACTAAACGGTCACTGACAAACATGgttccagacccaacaacattacatagtatcccctcttcatggctacagacccaacaacattatatagtatcccctcttcatggttacagacccaacattatatagtatcccctcttcatggttacagacccaacaacattatatagtatcccctcttcatggctacagacccaacaacattatatagtatcccctcttcatggctacagacccaacaacattatatagtatcccctcttcatggttacagacccaacaacattatatagtatctcctcttCATGGTtgcagacccaacaacattatatagtatcccatcttcatggttacagacccaacaacattatataataTCTcctcttcatggttacagacccaacaacattatatagtatcccctcttcatggctacagacccagcaacattatatagtatctcctcttcatggttacagacccagcaacattatatagtatctcctcatggttacagacccaacaacattatatagtatcccctcttcatggttacagacccaacaacattatatagtatcccctcctcatggttacagacccaacaacattatatagtatcccatcttcatggttacagaccc

Function

NR:

description
PREDICTED: P30 adhesin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624800 True 806 lncRNA 0.39 3 9792361 9793850

Neighbor

gene id symbol gene type direction distance location
LOC110487884 LOC106570642 coding upstream 167666 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 218581 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 259699 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 362673 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 406017 9382727 ~ 9386344 (+)
LOC110487893 LOC106570636 coding downstream 255346 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 297453 10091303 ~ 10092528 (+)
LOC118946540 NA coding downstream 528183 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 610522 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 643827 10437677 ~ 10441669 (+)
G2294776 NA non-coding upstream 4864 9787286 ~ 9787497 (+)
G2294775 NA non-coding upstream 5224 9786920 ~ 9787137 (+)
G2294773 NA non-coding upstream 7101 9784592 ~ 9785260 (+)
G2294753 NA non-coding upstream 12122 9780009 ~ 9780239 (+)
G2294692 LOC106594721 non-coding upstream 17561 9729576 ~ 9774800 (+)
G2294780 NA non-coding downstream 1773 9795623 ~ 9795943 (+)
G2294758 NA non-coding downstream 6632 9800482 ~ 9801200 (+)
G2294764 NA non-coding downstream 8014 9801864 ~ 9803898 (+)
G2294763 NA non-coding downstream 15081 9808931 ~ 9809553 (+)
G2294840 NA non-coding downstream 81111 9874961 ~ 9875194 (+)
G2294452 LOC106570648 other upstream 454606 9335335 ~ 9337755 (+)
G2294081 NA other upstream 689175 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 945109 8844013 ~ 8847252 (+)
G2293942 NA other upstream 996859 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1280620 8510872 ~ 8511770 (+)
G2294925 NA other downstream 336266 10130116 ~ 10131651 (+)
LOC110487904 snrpd1 other downstream 721104 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1491643 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1769697 11563547 ~ 11564590 (+)

Expression


Co-expression Network