Gene
RNA
| Item | Value |
|---|---|
| gene id | G2294769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 9876615 ~ 9877272 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2624790 | False | 658 | lncRNA | 0.45 | 1 | 9876615 | 9877272 |
| TU2624791 | True | 326 | lncRNA | 0.39 | 1 | 9876615 | 9876940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487884 | LOC106570642 | coding | upstream | 251920 | 9622027 ~ 9624695 (+) |
| cck-t | cck-t | coding | upstream | 302835 | 9568052 ~ 9573780 (+) |
| LOC110489367 | LOC106570646 | coding | upstream | 343953 | 9489794 ~ 9532662 (+) |
| LOC110487883 | LOC106570652 | coding | upstream | 446927 | 9410313 ~ 9429688 (+) |
| LOC110487882 | LOC106570647 | coding | upstream | 490271 | 9382727 ~ 9386344 (+) |
| LOC110487893 | LOC106570636 | coding | downstream | 171924 | 10049196 ~ 10064026 (+) |
| LOC118946535 | NA | coding | downstream | 214031 | 10091303 ~ 10092528 (+) |
| LOC118946540 | NA | coding | downstream | 444761 | 10318805 ~ 10323588 (+) |
| LOC110513484 | LOC106570612 | coding | downstream | 527100 | 10404372 ~ 10427604 (+) |
| si:ch211-199g17.9 | syce1 | coding | downstream | 560405 | 10437677 ~ 10441669 (+) |
| G2294840 | NA | non-coding | upstream | 1421 | 9874961 ~ 9875194 (+) |
| G2294763 | NA | non-coding | upstream | 67062 | 9808931 ~ 9809553 (+) |
| G2294764 | NA | non-coding | upstream | 72717 | 9801864 ~ 9803898 (+) |
| G2294758 | NA | non-coding | upstream | 75415 | 9800482 ~ 9801200 (+) |
| G2294780 | NA | non-coding | upstream | 80672 | 9795623 ~ 9795943 (+) |
| G2294757 | NA | non-coding | downstream | 1548 | 9878820 ~ 9879387 (+) |
| G2294856 | NA | non-coding | downstream | 51692 | 9928964 ~ 9929854 (+) |
| G2294823 | NA | non-coding | downstream | 68718 | 9945990 ~ 9976161 (+) |
| G2294876 | NA | non-coding | downstream | 90413 | 9967685 ~ 9967980 (+) |
| G2294810 | NA | non-coding | downstream | 103140 | 9980412 ~ 9982511 (+) |
| G2294452 | LOC106570648 | other | upstream | 538860 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 773429 | 9094792 ~ 9103186 (+) |
| G2293943 | LOC106570655 | other | upstream | 1029363 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 1081113 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 1364874 | 8510872 ~ 8511770 (+) |
| G2294925 | NA | other | downstream | 252844 | 10130116 ~ 10131651 (+) |
| LOC110487904 | snrpd1 | other | downstream | 637682 | 10509464 ~ 10521398 (+) |
| G2296150 | LOC106570575 | other | downstream | 1408221 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 1686275 | 11563547 ~ 11564590 (+) |
