G2294887


Basic Information

Item Value
gene id G2294887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10006541 ~ 10006747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624915
ACTGAATACAAAAAGGACATGTTCAGGCTTACTCACACCTgctcagaaaacacacacacacagtaaattaATCCACATGTACTAATAACAAGCCTTATCTTACAGGAGTGTATTTACTGTGTAGGTTCATACATGCAGAGACAAGATGGCGCCGATAGATAtagcagctctgcttctagctcttaAGCAACTTTGcagcattttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624915 True 207 lncRNA 0.39 1 10006541 10006747

Neighbor

gene id symbol gene type direction distance location
LOC110487884 LOC106570642 coding upstream 381846 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 432761 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 473879 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 576853 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 620197 9382727 ~ 9386344 (+)
LOC110487893 LOC106570636 coding downstream 42449 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 84556 10091303 ~ 10092528 (+)
LOC118946540 NA coding downstream 315286 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 397625 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 430930 10437677 ~ 10441669 (+)
G2294813 NA non-coding upstream 18248 9983160 ~ 9988293 (+)
G2294810 NA non-coding upstream 24030 9980412 ~ 9982511 (+)
G2294823 NA non-coding upstream 30380 9945990 ~ 9976161 (+)
G2294876 NA non-coding upstream 38561 9967685 ~ 9967980 (+)
G2294856 NA non-coding upstream 76687 9928964 ~ 9929854 (+)
G2294888 NA non-coding downstream 143 10006890 ~ 10007115 (+)
G2294889 NA non-coding downstream 4368 10011115 ~ 10011412 (+)
G2294893 NA non-coding downstream 11907 10018654 ~ 10019504 (+)
G2294905 NA non-coding downstream 79271 10086018 ~ 10094011 (+)
G2294922 NA non-coding downstream 116877 10123624 ~ 10123842 (+)
G2294452 LOC106570648 other upstream 668786 9335335 ~ 9337755 (+)
G2294081 NA other upstream 903355 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 1159289 8844013 ~ 8847252 (+)
G2293942 NA other upstream 1211039 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1494800 8510872 ~ 8511770 (+)
G2294925 NA other downstream 123369 10130116 ~ 10131651 (+)
LOC110487904 snrpd1 other downstream 508207 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1278746 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1556800 11563547 ~ 11564590 (+)

Expression


Co-expression Network