Gene
RNA
| Item | Value |
|---|---|
| gene id | G2294893 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 10018654 ~ 10019504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2624921 | False | 331 | lncRNA | 0.38 | 3 | 10018654 | 10019504 |
| TU2624923 | True | 487 | lncRNA | 0.38 | 2 | 10018654 | 10019504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487884 | LOC106570642 | coding | upstream | 393959 | 9622027 ~ 9624695 (+) |
| cck-t | cck-t | coding | upstream | 444874 | 9568052 ~ 9573780 (+) |
| LOC110489367 | LOC106570646 | coding | upstream | 485992 | 9489794 ~ 9532662 (+) |
| LOC110487883 | LOC106570652 | coding | upstream | 588966 | 9410313 ~ 9429688 (+) |
| LOC110487882 | LOC106570647 | coding | upstream | 632310 | 9382727 ~ 9386344 (+) |
| LOC110487893 | LOC106570636 | coding | downstream | 29692 | 10049196 ~ 10064026 (+) |
| LOC118946535 | NA | coding | downstream | 71799 | 10091303 ~ 10092528 (+) |
| LOC118946540 | NA | coding | downstream | 302529 | 10318805 ~ 10323588 (+) |
| LOC110513484 | LOC106570612 | coding | downstream | 384868 | 10404372 ~ 10427604 (+) |
| si:ch211-199g17.9 | syce1 | coding | downstream | 418173 | 10437677 ~ 10441669 (+) |
| G2294889 | NA | non-coding | upstream | 7242 | 10011115 ~ 10011412 (+) |
| G2294888 | NA | non-coding | upstream | 11539 | 10006890 ~ 10007115 (+) |
| G2294887 | NA | non-coding | upstream | 11907 | 10006541 ~ 10006747 (+) |
| G2294813 | NA | non-coding | upstream | 30361 | 9983160 ~ 9988293 (+) |
| G2294810 | NA | non-coding | upstream | 36143 | 9980412 ~ 9982511 (+) |
| G2294905 | NA | non-coding | downstream | 66514 | 10086018 ~ 10094011 (+) |
| G2294922 | NA | non-coding | downstream | 104120 | 10123624 ~ 10123842 (+) |
| G2294923 | NA | non-coding | downstream | 104551 | 10124055 ~ 10124316 (+) |
| G2294925 | NA | non-coding | downstream | 111329 | 10130116 ~ 10131651 (+) |
| G2294931 | NA | non-coding | downstream | 118516 | 10138020 ~ 10167492 (+) |
| G2294452 | LOC106570648 | other | upstream | 680899 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 915468 | 9094792 ~ 9103186 (+) |
| G2293943 | LOC106570655 | other | upstream | 1171402 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 1223152 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 1506913 | 8510872 ~ 8511770 (+) |
| LOC110487904 | snrpd1 | other | downstream | 495450 | 10509464 ~ 10521398 (+) |
| G2296150 | LOC106570575 | other | downstream | 1265989 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 1544043 | 11563547 ~ 11564590 (+) |
