Gene
RNA
| Item | Value |
|---|---|
| gene id | G2294905 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 10086018 ~ 10094011 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2624941 | False | 786 | lncRNA | 0.45 | 4 | 10086018 | 10094011 |
| TU2624942 | True | 181 | lncRNA | 0.48 | 2 | 10089749 | 10094011 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487893 | LOC106570636 | coding | upstream | 21992 | 10049196 ~ 10064026 (+) |
| LOC110487884 | LOC106570642 | coding | upstream | 461323 | 9622027 ~ 9624695 (+) |
| cck-t | cck-t | coding | upstream | 512238 | 9568052 ~ 9573780 (+) |
| LOC110489367 | LOC106570646 | coding | upstream | 553356 | 9489794 ~ 9532662 (+) |
| LOC110487883 | LOC106570652 | coding | upstream | 656330 | 9410313 ~ 9429688 (+) |
| LOC118946540 | NA | coding | downstream | 228022 | 10318805 ~ 10323588 (+) |
| LOC110513484 | LOC106570612 | coding | downstream | 310361 | 10404372 ~ 10427604 (+) |
| si:ch211-199g17.9 | syce1 | coding | downstream | 343666 | 10437677 ~ 10441669 (+) |
| LOC110489372 | LOC106570609 | coding | downstream | 372354 | 10466365 ~ 10490055 (+) |
| LOC110489373 | LOC106570620 | coding | downstream | 413082 | 10507093 ~ 10509282 (+) |
| G2294893 | NA | non-coding | upstream | 66514 | 10018654 ~ 10019504 (+) |
| G2294889 | NA | non-coding | upstream | 74606 | 10011115 ~ 10011412 (+) |
| G2294888 | NA | non-coding | upstream | 78903 | 10006890 ~ 10007115 (+) |
| G2294887 | NA | non-coding | upstream | 79271 | 10006541 ~ 10006747 (+) |
| G2294813 | NA | non-coding | upstream | 97725 | 9983160 ~ 9988293 (+) |
| G2294922 | NA | non-coding | downstream | 29613 | 10123624 ~ 10123842 (+) |
| G2294923 | NA | non-coding | downstream | 30044 | 10124055 ~ 10124316 (+) |
| G2294925 | NA | non-coding | downstream | 36822 | 10130116 ~ 10131651 (+) |
| G2294931 | NA | non-coding | downstream | 44009 | 10138020 ~ 10167492 (+) |
| G2294941 | NA | non-coding | downstream | 76525 | 10170536 ~ 10185915 (+) |
| G2294452 | LOC106570648 | other | upstream | 748263 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 982832 | 9094792 ~ 9103186 (+) |
| G2293943 | LOC106570655 | other | upstream | 1238766 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 1290516 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 1574277 | 8510872 ~ 8511770 (+) |
| LOC110487904 | snrpd1 | other | downstream | 420943 | 10509464 ~ 10521398 (+) |
| G2296150 | LOC106570575 | other | downstream | 1191482 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 1469536 | 11563547 ~ 11564590 (+) |
