G2294925


Basic Information

Item Value
gene id G2294925
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10130116 ~ 10131651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624966
tgtgtgtgcacctggtcactcagcagtatgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtgtgtgtgtgtgtgtacctggtcactcagcagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatacctggtCACTCAGCAGTATGTGTATTCCTGTGGGTCCTTGTCGGTAGACCTGGTTGATGTGTCCCAGtggaacactacacacacacgccatCTTCCTGATCAACTCAGCCGCAGTCAGCTCCTCCAGGTACAGAGCATggtacactgcacacacacacacacacacacacacacacacacacacacacattaaaacacacagaGGTGTAGACAGTAGAATAGAGACACAGAGGTGTAGACAGTAGAATGGAGACACAGAGGTGTCAAAAGTAGAATGGAGACACAGAGGTGTAGACAGTagaatagagacacagagatgtagacagtagaatatagacacacagaggtgtatacagtagaatatagacaCAGAGgtgtATACAGTAAAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACACACAGAGgtgtATACAGTAGAATGGAGACACACAGAGGTGTATACAGTAGAATGGAGACACACAGAGGTGTATACAGTAGAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACAGAGGTGTAGACAGTATAATGgagacacacacagtggtgtatACAGTAGAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACAGGCATTAACATTTCTGTTCATACCTGCACTTTCCCATTTTTTCTGAGTAAGTACAAACAGTATATTTAAAAGGGTCAATCTGCATTTCAAACCCAGCCACTGTTTTGAGAAACGGGGCTGGATAAATTCACCTATGGGTGCTCGGACTGACCACAATGATAGTTTAAACCATGTTTTCAGGCTGAACTGTGTTTgaaaacattggagtaaaacaagcataAATCCTGGGGTTTGATAGGGATTTAAAAGTCGTAAAAGTGGATGTGAAAACagcagattgaccctttaaac
>TU2624964
cagtagaatatagacacacagaggtgtagacagtagaatagagacacagagatgtagacagtagaatatagacacacagaggtgtatacagtagaatatagacacacacagaggtgttGACAGTAGATTGGAGACACACAGAGGTGTAGACAGTAgaatagagacacacacagaggtgtagacagtagaatagagacacacagaggtgtATACAGTAAAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACACACAGAGgtgtATACAGTAGAATGGAGACACACAGAGGTGTATACAGTAGAATGGAGACACACAGAGGTGTATACAGTAGAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACAGAGGTGTAGACAGTATAATGgagacacacacagtggtgtatACAGTAGAATGGAGACACACAGAGGTGTAGACAGTAGAATGGAGACAGGCATTAACATTTCTGTTCATACCTGCACTTTCCCATTTTTTCTGAGTAAGTACAAACAGTATATTTAAAAGGGTCAATCTGCATTTCAAACCCAGCCACTGTTTTGAGAAACGGGGCTGGATAAATTCACCTATGGGTGCTCGGACTGACCACAATGATAGTTTAAACCATGTTTTCAGGCTGAACTGTGTTTgaaaacattggagtaaaacaagcataAATCCTGGGGTTTGATAGGGATTTAAAAGTCGTAAAAGTGGATGTGAAAACagcagattgaccctttaaac

Function

NR:

description
histidine-rich glycoprotein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624966 False 1230 TUCP 0.45 3 10130116 10131651
TU2624964 True 757 lncRNA 0.41 2 10130833 10131651

Neighbor

gene id symbol gene type direction distance location
LOC118946535 NA coding upstream 38305 10091303 ~ 10092528 (+)
LOC110487893 LOC106570636 coding upstream 66807 10049196 ~ 10064026 (+)
LOC110487884 LOC106570642 coding upstream 506138 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 557053 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 598171 9489794 ~ 9532662 (+)
LOC118946540 NA coding downstream 190382 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 272721 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 306026 10437677 ~ 10441669 (+)
LOC110489372 LOC106570609 coding downstream 334714 10466365 ~ 10490055 (+)
LOC110489373 LOC106570620 coding downstream 375442 10507093 ~ 10509282 (+)
G2294923 NA non-coding upstream 6517 10124055 ~ 10124316 (+)
G2294922 NA non-coding upstream 6991 10123624 ~ 10123842 (+)
G2294905 NA non-coding upstream 36822 10086018 ~ 10094011 (+)
G2294893 NA non-coding upstream 111329 10018654 ~ 10019504 (+)
G2294889 NA non-coding upstream 119421 10011115 ~ 10011412 (+)
G2294931 NA non-coding downstream 6369 10138020 ~ 10167492 (+)
G2294941 NA non-coding downstream 38885 10170536 ~ 10185915 (+)
G2294951 NA non-coding downstream 71129 10202780 ~ 10202989 (+)
G2294958 clasp2 non-coding downstream 81556 10213207 ~ 10226042 (+)
G2294962 NA non-coding downstream 98183 10229834 ~ 10250320 (+)
G2294452 LOC106570648 other upstream 793078 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1027647 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 1283581 8844013 ~ 8847252 (+)
G2293942 NA other upstream 1335331 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1619092 8510872 ~ 8511770 (+)
LOC110487904 snrpd1 other downstream 383303 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1153842 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1431896 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1775056 11906205 ~ 11910366 (+)

Expression


Co-expression Network