G2294964


Basic Information

Item Value
gene id G2294964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10233727 ~ 10234343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2625035
agatggagggatgagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagggatgtatatagatggagaggtggagggatgtatATAgatgaggggtggagggatgtatatagatggagggatgtatatagatgaggggtggagggatgtatatagatggagggatgtatatagatggagggatggaggatgtaTATAGAGAGACATGAAgatgaggggtggagggatgcagGCAGAGGTGGAGTTGTTAGAGGGATGAGTCGGAGAGTTCTTACCTCCTCTGCTCGTTGCTTTGTAGATGGAACTAACACTGGAGGGAGCTAGAGATGacggaggaaggagaggagaaagagggaggaaaggaaggagaggagaaagacagggaggaaaggaaggagaggagaaagacagggaggaaaggaagaaaggaagg

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2625035 True 524 lncRNA 0.46 3 10233727 10234343

Neighbor

gene id symbol gene type direction distance location
LOC118946535 NA coding upstream 141199 10091303 ~ 10092528 (+)
LOC110487893 LOC106570636 coding upstream 169701 10049196 ~ 10064026 (+)
LOC110487884 LOC106570642 coding upstream 609032 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 659947 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 701065 9489794 ~ 9532662 (+)
LOC118946540 NA coding downstream 87690 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 170029 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 203334 10437677 ~ 10441669 (+)
LOC110489372 LOC106570609 coding downstream 232022 10466365 ~ 10490055 (+)
LOC110489373 LOC106570620 coding downstream 272750 10507093 ~ 10509282 (+)
G2294958 clasp2 non-coding upstream 7685 10213207 ~ 10226042 (+)
G2294951 NA non-coding upstream 30738 10202780 ~ 10202989 (+)
G2294941 NA non-coding upstream 47812 10170536 ~ 10185915 (+)
G2294931 NA non-coding upstream 66235 10138020 ~ 10167492 (+)
G2294925 NA non-coding upstream 102076 10130116 ~ 10131651 (+)
G2294970 NA non-coding downstream 7251 10241594 ~ 10242212 (+)
G2294991 NA non-coding downstream 45185 10279528 ~ 10279900 (+)
G2294996 NA non-coding downstream 70686 10305029 ~ 10306296 (+)
G2294998 NA non-coding downstream 77063 10311406 ~ 10344133 (+)
G2294452 LOC106570648 other upstream 895972 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1130541 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 1386475 8844013 ~ 8847252 (+)
G2293942 NA other upstream 1438225 8791101 ~ 8876464 (+)
LOC110487904 snrpd1 other downstream 280611 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1051150 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1329204 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1672364 11906205 ~ 11910366 (+)

Expression


Co-expression Network