Gene
RNA
| Item | Value |
|---|---|
| gene id | G2295089 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 10549140 ~ 10573417 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2625261 | True | 224 | lncRNA | 0.37 | 2 | 10549140 | 10573417 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487904 | snrpd1 | coding | upstream | 27742 | 10509464 ~ 10521398 (+) |
| LOC110489373 | LOC106570620 | coding | upstream | 39858 | 10507093 ~ 10509282 (+) |
| LOC110489372 | LOC106570609 | coding | upstream | 59085 | 10466365 ~ 10490055 (+) |
| si:ch211-199g17.9 | syce1 | coding | upstream | 107471 | 10437677 ~ 10441669 (+) |
| LOC110513484 | LOC106570612 | coding | upstream | 121536 | 10404372 ~ 10427604 (+) |
| btd | LOC106570600 | coding | downstream | 4989 | 10578406 ~ 10586437 (+) |
| LOC110487909 | LOC106570592 | coding | downstream | 93273 | 10666690 ~ 10669052 (+) |
| polr1f | twistnb | coding | downstream | 96831 | 10670248 ~ 10675600 (+) |
| LOC110489377 | LOC106588728 | coding | downstream | 185634 | 10759051 ~ 10809399 (+) |
| il6 | il-6 | coding | downstream | 428631 | 11002048 ~ 11004436 (+) |
| G2295082 | NA | non-coding | upstream | 21062 | 10527119 ~ 10528078 (+) |
| G2295080 | NA | non-coding | upstream | 23255 | 10524658 ~ 10525885 (+) |
| G2295078 | NA | non-coding | upstream | 26331 | 10522467 ~ 10522809 (+) |
| G2295077 | NA | non-coding | upstream | 35787 | 10512886 ~ 10513353 (+) |
| G2295101 | LOC106570616 | non-coding | downstream | 22017 | 10595434 ~ 10598111 (+) |
| G2295139 | NA | non-coding | downstream | 75386 | 10648803 ~ 10695787 (+) |
| G2295147 | NA | non-coding | downstream | 89214 | 10662631 ~ 10663333 (+) |
| G2295152 | NA | non-coding | downstream | 96012 | 10669429 ~ 10669848 (+) |
| G2295163 | NA | non-coding | downstream | 132345 | 10705762 ~ 10706065 (+) |
| LOC118946540 | NA | other | upstream | 225552 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 417489 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1211385 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 1445954 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 712076 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 990130 | 11563547 ~ 11564590 (+) |
| LOC110487932 | LOC106570557 | other | downstream | 1333290 | 11906205 ~ 11910366 (+) |
| G2296450 | NA | other | downstream | 1341779 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 3056645 | 13630062 ~ 13630795 (+) |
