Gene
RNA
| Item | Value |
|---|---|
| gene id | G2295152 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 10669429 ~ 10669848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2625344 | False | 280 | lncRNA | 0.40 | 3 | 10669429 | 10669848 |
| TU2625343 | True | 232 | lncRNA | 0.41 | 2 | 10669539 | 10669848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487909 | LOC106570592 | coding | upstream | 377 | 10666690 ~ 10669052 (+) |
| btd | LOC106570600 | coding | upstream | 82992 | 10578406 ~ 10586437 (+) |
| LOC110487905 | LOC106570604 | coding | upstream | 100699 | 10541656 ~ 10568730 (+) |
| LOC110487904 | snrpd1 | coding | upstream | 148031 | 10509464 ~ 10521398 (+) |
| LOC110489373 | LOC106570620 | coding | upstream | 160147 | 10507093 ~ 10509282 (+) |
| polr1f | twistnb | coding | downstream | 400 | 10670248 ~ 10675600 (+) |
| LOC110489377 | LOC106588728 | coding | downstream | 89203 | 10759051 ~ 10809399 (+) |
| il6 | il-6 | coding | downstream | 332200 | 11002048 ~ 11004436 (+) |
| LOC110487935 | LOC106570554 | coding | downstream | 523202 | 11193050 ~ 11234468 (+) |
| LOC118946500 | LOC106570575 | coding | downstream | 593684 | 11262547 ~ 11278404 (+) |
| G2295147 | NA | non-coding | upstream | 6096 | 10662631 ~ 10663333 (+) |
| G2295101 | LOC106570616 | non-coding | upstream | 71318 | 10595434 ~ 10598111 (+) |
| G2295090 | NA | non-coding | upstream | 94242 | 10550102 ~ 10575187 (+) |
| G2295089 | NA | non-coding | upstream | 96012 | 10549140 ~ 10573417 (+) |
| G2295081 | NA | non-coding | upstream | 97185 | 10568847 ~ 10572244 (+) |
| G2295163 | NA | non-coding | downstream | 35914 | 10705762 ~ 10706065 (+) |
| G2295698 | NA | non-coding | downstream | 84049 | 10753897 ~ 10754122 (+) |
| G2295701 | NA | non-coding | downstream | 88367 | 10758215 ~ 10758714 (+) |
| G2295711 | NA | non-coding | downstream | 115627 | 10785475 ~ 10785798 (+) |
| G2295712 | NA | non-coding | downstream | 116770 | 10786618 ~ 10787039 (+) |
| LOC118946540 | NA | other | upstream | 345841 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 537778 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1331674 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 1566243 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 615645 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 893699 | 11563547 ~ 11564590 (+) |
| LOC110487932 | LOC106570557 | other | downstream | 1236859 | 11906205 ~ 11910366 (+) |
| G2296450 | NA | other | downstream | 1245348 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2960214 | 13630062 ~ 13630795 (+) |
