G2295163


Basic Information

Item Value
gene id G2295163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10705762 ~ 10706065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2625355
ttcatctgtttatagcacctagttaacacagttgtcatgttcatctgtttatagcacctagttaacacagttgtcatgttcatctgtttatagcacctagttaacacacttgtcatattcatctgtttatagcacctagttaacacagttgtcatattcatctgtttatagcacctagttaacacagttgtcatgttcatctgtttatagcacctagttaacacagttgtcatgttcatctgtttatagcacctagttaacacagttgtcatgttcatctgtttatagcacctagttaacacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2625355 True 304 lncRNA 0.35 1 10705762 10706065

Neighbor

gene id symbol gene type direction distance location
polr1f twistnb coding upstream 30162 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 36710 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 119325 10578406 ~ 10586437 (+)
LOC110487905 LOC106570604 coding upstream 137032 10541656 ~ 10568730 (+)
LOC110487904 snrpd1 coding upstream 184364 10509464 ~ 10521398 (+)
LOC110489377 LOC106588728 coding downstream 52986 10759051 ~ 10809399 (+)
il6 il-6 coding downstream 295983 11002048 ~ 11004436 (+)
LOC110487935 LOC106570554 coding downstream 486985 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 557467 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 847284 11553349 ~ 11656524 (+)
G2295139 NA non-coding upstream 9975 10648803 ~ 10695787 (+)
G2295152 NA non-coding upstream 35914 10669429 ~ 10669848 (+)
G2295147 NA non-coding upstream 42429 10662631 ~ 10663333 (+)
G2295101 LOC106570616 non-coding upstream 107651 10595434 ~ 10598111 (+)
G2295090 NA non-coding upstream 130575 10550102 ~ 10575187 (+)
G2295698 NA non-coding downstream 47832 10753897 ~ 10754122 (+)
G2295701 NA non-coding downstream 52150 10758215 ~ 10758714 (+)
G2295711 NA non-coding downstream 79410 10785475 ~ 10785798 (+)
G2295712 NA non-coding downstream 80553 10786618 ~ 10787039 (+)
G2295714 NA non-coding downstream 91144 10797209 ~ 10797612 (+)
LOC118946540 NA other upstream 382174 10318805 ~ 10323588 (+)
G2294925 NA other upstream 574111 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1368007 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1602576 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 579428 11285493 ~ 11290303 (+)
G2296278 NA other downstream 857482 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1200642 11906205 ~ 11910366 (+)
G2296450 NA other downstream 1209131 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2923997 13630062 ~ 13630795 (+)

Expression


Co-expression Network