G2295701


Basic Information

Item Value
gene id G2295701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10758215 ~ 10758714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626065
caagctggtcctggggctctgttcacaaacacaaacacaccccacagagccccaggaaagcaacacaattagacccaaacaaatcatgagaaaacaacaagataattacttgacacattggaaagaattaacaaaaaaatagagcaaactagaatgctatttggccctaaacagagagtacacagtggcagaatacctgaccactgtgactgacccaaacttaaggaaagctttgactatgtacagactcagtgagtatagccttgctattgagaaaggccgccgtaggcagacatggctctcaagagaagacaggctatgtgctcactgcccacaaaatgaggtggaaactgagctgcactatCTAACCTCCtgatgtatgaccatattagagacacatatttccctcagattacacagatcaacaaataattaaaaaacaaacctatttttgataaactcccatatctactgggtgaaataccacagtgtgccatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626065 True 500 lncRNA 0.42 1 10758215 10758714

Neighbor

gene id symbol gene type direction distance location
polr1f twistnb coding upstream 82615 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 89163 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 171778 10578406 ~ 10586437 (+)
LOC110487905 LOC106570604 coding upstream 189485 10541656 ~ 10568730 (+)
LOC110487904 snrpd1 coding upstream 236817 10509464 ~ 10521398 (+)
LOC110489377 LOC106588728 coding downstream 337 10759051 ~ 10809399 (+)
il6 il-6 coding downstream 243334 11002048 ~ 11004436 (+)
LOC110487935 LOC106570554 coding downstream 434336 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 504818 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 794635 11553349 ~ 11656524 (+)
G2295698 NA non-coding upstream 4093 10753897 ~ 10754122 (+)
G2295163 NA non-coding upstream 52150 10705762 ~ 10706065 (+)
G2295139 NA non-coding upstream 62428 10648803 ~ 10695787 (+)
G2295152 NA non-coding upstream 88367 10669429 ~ 10669848 (+)
G2295147 NA non-coding upstream 94882 10662631 ~ 10663333 (+)
G2295711 NA non-coding downstream 26761 10785475 ~ 10785798 (+)
G2295712 NA non-coding downstream 27904 10786618 ~ 10787039 (+)
G2295714 NA non-coding downstream 38495 10797209 ~ 10797612 (+)
G2295720 NA non-coding downstream 48254 10806968 ~ 10807293 (+)
G2295694 LOC106570586 non-coding downstream 56224 10814938 ~ 10816360 (+)
LOC118946540 NA other upstream 434627 10318805 ~ 10323588 (+)
G2294925 NA other upstream 626564 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1420460 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1655029 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 526779 11285493 ~ 11290303 (+)
G2296278 NA other downstream 804833 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1147993 11906205 ~ 11910366 (+)
G2296450 NA other downstream 1156482 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2871348 13630062 ~ 13630795 (+)

Expression


Co-expression Network