G2295714


Basic Information

Item Value
gene id G2295714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10797209 ~ 10797612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626078
acacacaacacaacacaacacacacaacacaacacacacaacacacagcctgGTAAgatacacacaacacaacacaacacaacacacacaccacaacacaacacaacacacagcctgGTAAgatacacacaacacaacacaacacacagcctgGTAagatacacacaccacaccacaacacacacaacacaacacacacaacacaacacaacacacagcctgGTAAgatacacacaacacaacacaacacacagcctgGTAAgatacacacaacacaacacaacacacagcctgGTAAgatacacacaacacaacacaacacacagcctgGTAAgatacacacaacacaacacaacacacagcctgGTAAgatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626078 True 377 lncRNA 0.45 2 10797209 10797612

Neighbor

gene id symbol gene type direction distance location
polr1f twistnb coding upstream 121609 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 128157 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 210772 10578406 ~ 10586437 (+)
LOC110487905 LOC106570604 coding upstream 228479 10541656 ~ 10568730 (+)
LOC110487904 snrpd1 coding upstream 275811 10509464 ~ 10521398 (+)
il6 il-6 coding downstream 204436 11002048 ~ 11004436 (+)
LOC110487935 LOC106570554 coding downstream 395438 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 465920 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 755737 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 866388 11664000 ~ 11742813 (+)
G2295712 NA non-coding upstream 10170 10786618 ~ 10787039 (+)
G2295711 NA non-coding upstream 11411 10785475 ~ 10785798 (+)
G2295701 NA non-coding upstream 38495 10758215 ~ 10758714 (+)
G2295698 NA non-coding upstream 43087 10753897 ~ 10754122 (+)
G2295163 NA non-coding upstream 91144 10705762 ~ 10706065 (+)
G2295720 NA non-coding downstream 9356 10806968 ~ 10807293 (+)
G2295694 LOC106570586 non-coding downstream 17326 10814938 ~ 10816360 (+)
G2295721 NA non-coding downstream 19900 10817512 ~ 10817834 (+)
G2295733 NA non-coding downstream 34358 10831970 ~ 10908016 (+)
G2295704 NA non-coding downstream 36743 10834355 ~ 10891081 (+)
LOC118946540 NA other upstream 473621 10318805 ~ 10323588 (+)
G2294925 NA other upstream 665558 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1459454 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1694023 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 487881 11285493 ~ 11290303 (+)
G2296278 NA other downstream 765935 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1109095 11906205 ~ 11910366 (+)
G2296450 NA other downstream 1117584 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2832450 13630062 ~ 13630795 (+)

Expression


Co-expression Network