G2295759 (LOC106570585)


Basic Information

Item Value
gene id G2295759
gene name LOC106570585
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10889077 ~ 10889530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626130
TTCATGAATGTCTTGATGTGTTCGTCCTCTCGTAGGAAGTCCTTATATAGGCGTGTCCAGTGAGAGACCAGGTGTAATACCTTCCTCTTCCTATAGAGggcctccttcccttcctcctgaCGCACACGCTTACTGCTGTAGTGTCCGAGCAGGGCCTGACAGAGGTCGTTGGTCGTCATGAACACCAGGTACGTCAACAGGAAGTCATCCAGCAGCATC

Function

NR:

description
PREDICTED: rap guanine nucleotide exchange factor 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626130 True 219 lncRNA 0.52 2 10889077 10889530

Neighbor

gene id symbol gene type direction distance location
LOC110489377 LOC106588728 coding upstream 79678 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 213477 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 220025 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 302640 10578406 ~ 10586437 (+)
LOC110487905 LOC106570604 coding upstream 320347 10541656 ~ 10568730 (+)
il6 il-6 coding downstream 112518 11002048 ~ 11004436 (+)
LOC110487935 LOC106570554 coding downstream 303520 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 374002 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 663819 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 774470 11664000 ~ 11742813 (+)
G2295742 NA non-coding upstream 42353 10845415 ~ 10846724 (+)
G2295721 NA non-coding upstream 71243 10817512 ~ 10817834 (+)
G2295694 LOC106570586 non-coding upstream 72717 10814938 ~ 10816360 (+)
G2295720 NA non-coding upstream 81784 10806968 ~ 10807293 (+)
G2295714 NA non-coding upstream 91465 10797209 ~ 10797612 (+)
G2295760 NA non-coding downstream 1999 10891529 ~ 10899925 (+)
G2295799 NA non-coding downstream 66627 10956157 ~ 10956365 (+)
G2295811 NA non-coding downstream 88823 10978353 ~ 11005987 (+)
G2295813 LOC106570580 non-coding downstream 119645 11009175 ~ 11012661 (+)
G2295826 NA non-coding downstream 127913 11017443 ~ 11060069 (+)
LOC110487904 snrpd1 other upstream 367770 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 565489 10318805 ~ 10323588 (+)
G2294925 NA other upstream 757426 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1551322 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1785891 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 395963 11285493 ~ 11290303 (+)
G2296278 NA other downstream 674017 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 1017177 11906205 ~ 11910366 (+)
G2296450 NA other downstream 1025666 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2740532 13630062 ~ 13630795 (+)

Expression


Co-expression Network