Gene
RNA
| Item | Value |
|---|---|
| gene id | G2295760 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 10891529 ~ 10899925 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626136 | False | 390 | lncRNA | 0.50 | 2 | 10891529 | 10891972 |
| TU2626137 | True | 293 | lncRNA | 0.50 | 2 | 10891529 | 10899925 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489377 | LOC106588728 | coding | upstream | 82130 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 215929 | 10670248 ~ 10675600 (+) |
| LOC110487909 | LOC106570592 | coding | upstream | 222477 | 10666690 ~ 10669052 (+) |
| btd | LOC106570600 | coding | upstream | 305092 | 10578406 ~ 10586437 (+) |
| LOC110487905 | LOC106570604 | coding | upstream | 322799 | 10541656 ~ 10568730 (+) |
| il6 | il-6 | coding | downstream | 102123 | 11002048 ~ 11004436 (+) |
| LOC110487935 | LOC106570554 | coding | downstream | 293125 | 11193050 ~ 11234468 (+) |
| LOC118946500 | LOC106570575 | coding | downstream | 363607 | 11262547 ~ 11278404 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 653424 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 764075 | 11664000 ~ 11742813 (+) |
| G2295704 | NA | non-coding | upstream | 448 | 10834355 ~ 10891081 (+) |
| G2295759 | LOC106570585 | non-coding | upstream | 1999 | 10889077 ~ 10889530 (+) |
| G2295742 | NA | non-coding | upstream | 44805 | 10845415 ~ 10846724 (+) |
| G2295721 | NA | non-coding | upstream | 73695 | 10817512 ~ 10817834 (+) |
| G2295694 | LOC106570586 | non-coding | upstream | 75169 | 10814938 ~ 10816360 (+) |
| G2295799 | NA | non-coding | downstream | 56232 | 10956157 ~ 10956365 (+) |
| G2295811 | NA | non-coding | downstream | 78428 | 10978353 ~ 11005987 (+) |
| G2295813 | LOC106570580 | non-coding | downstream | 109250 | 11009175 ~ 11012661 (+) |
| G2295826 | NA | non-coding | downstream | 117518 | 11017443 ~ 11060069 (+) |
| G2295849 | NA | non-coding | downstream | 148596 | 11048521 ~ 11049277 (+) |
| LOC110487904 | snrpd1 | other | upstream | 370222 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 567941 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 759878 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1553774 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 1788343 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 385568 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 663622 | 11563547 ~ 11564590 (+) |
| LOC110487932 | LOC106570557 | other | downstream | 1006782 | 11906205 ~ 11910366 (+) |
| G2296450 | NA | other | downstream | 1015271 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2730137 | 13630062 ~ 13630795 (+) |
