G2295973


Basic Information

Item Value
gene id G2295973
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10976509 ~ 10977602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626403
tgccctctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgctgccacccccgtgcttcacggttgggatggtgttcttcggcttgcaagcatcaccctttttcttccaaacataacaattgtcattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaagtacgatctttgtcaccatgtcctgttgcaaaccatagtctggcttttttatggaggttttggagcagtggcttcttccgtgctgagcggcctttcaggttatttcaatataggactcattttactgtggatatagatacttttgtacccgtttcctccagcatcttcacaaggttctttgctgttgttctgggattgatttgcactttttgcaccaaagtacgttcatctctaggagaccgaacgcgtctccttcctgagcggtatgacggctgcgtggtcccatggtgtttatacttgtgtactattgtttgtacagatgaagtaccttcaggcctttggaaattgctcccaaggatgaaccagacttgtgaaggtctacacatttttttctgaggtcttggttgatttatttggatttttcCATGACatcaagcaaagagccactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaaccatgtcaattagccaatcagaagcttctaaagccatgacataagtttctggaatttttcaagctgtttaaaggtacagtcaacttagtgtatgtaaacatctgactcactggaattgtgatacagtgaattataagtgaaaacatttgttggaaaaatgacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagttagttaacaagacatttgtggagtggttgaaaaacaagttttaatgactccaacctaagtgtatgtaaacttccaacttcaactgtatgtgccaGCTGGTTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626403 True 1022 lncRNA 0.42 2 10976509 10977602

Neighbor

gene id symbol gene type direction distance location
LOC110487912 LOC106588797 coding downstream 24034 10868295 ~ 10952475 (-)
LOC110487913 LOC106570587 coding downstream 109368 10843932 ~ 10867141 (-)
LOC110489378 LOC106570586 coding downstream 139118 10815696 ~ 10837391 (-)
LOC110487911 LOC106570591 coding downstream 284696 10682548 ~ 10691813 (-)
LOC110489376 LOC106570616 coding downstream 329697 10596973 ~ 10646812 (-)
LOC110487917 LOC106570580 coding upstream 31529 11009131 ~ 11041211 (-)
LOC110487914 cpne4 coding upstream 128424 11106026 ~ 11192970 (-)
LOC110487919 LOC106570575 coding upstream 296653 11274255 ~ 11455993 (-)
fabph fabph coding upstream 564598 11542200 ~ 11543609 (-)
LOC110487921 mrpl53 coding upstream 567637 11545239 ~ 11548738 (-)
G2295964 NA non-coding downstream 13745 10956900 ~ 10962764 (-)
G2295938 NA non-coding downstream 59624 10916506 ~ 10916885 (-)
G2295936 NA non-coding downstream 61533 10912527 ~ 10914976 (-)
G2295935 NA non-coding downstream 64400 10910409 ~ 10912109 (-)
G2295910 NA non-coding downstream 149958 10824590 ~ 10826551 (-)
G2295960 NA non-coding upstream 26566 11004168 ~ 11008726 (-)
G2295989 NA non-coding upstream 39823 11017425 ~ 11060044 (-)
G2295997 NA non-coding upstream 56322 11033924 ~ 11085439 (-)
G2296034 NA non-coding upstream 123089 11100691 ~ 11101111 (-)
G2296083 NA non-coding upstream 148517 11126119 ~ 11130551 (-)
G2295895 NA other downstream 187950 10788107 ~ 10788559 (-)
LOC110489370 clasp2 other downstream 766684 10205530 ~ 10316136 (-)
LOC110487895 LOC106570596 other downstream 937860 10014678 ~ 10038693 (-)
LOC110487885 LOC106570639 other downstream 1304949 9667465 ~ 9705713 (-)
G2294565 NA other downstream 1532769 9443280 ~ 9443740 (-)
G2296582 NA other upstream 504003 11481605 ~ 11488380 (-)
LOC110487923 LOC106588825 other upstream 1155016 12130756 ~ 12146683 (-)
G2298681 NA other upstream 2673099 13650701 ~ 13651184 (-)
G2298700 NA other upstream 2725099 13702701 ~ 13702996 (-)

Expression


Co-expression Network