G2295811


Basic Information

Item Value
gene id G2295811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10978353 ~ 11005987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626198
ATTCGGGAGGACAggttcgtggtaatggctggagtagaatcagtggaatggtatcaaataaatATTCACTTCTttctagccattattatgagccatcctcccttcAGCAGTCTCCACTGTAGTAGGTGCAAGgtacactggtttgagtgtgtcaagaactgcaacgctgctgggtttttcacactcaacagtttcccatgtgtaacaataatggtccaccacccaaaggacatccagccaatttgacacaattgtgggaagcaatggagtcaacatgggccagcatccccgtggaatgctttcgacaccctGTAGAATCCATGTCCCGACTAATTAAGGCTATTCTGATATTAAGGTGTTCctagtgttttgtacactcagtacacCGTActagtcagaagtttggacacacctattcatcgcagggtttttcttaaattttacattgtagaataatagtgaagacatcaaaaccatgagataactcatatggaatcatgtagtaaccaaaaaaatgattaaacaaatgtatatttaagattcttcaaagtaggcacccttagacttgatgacagcttttcacacgcttggcattctctcaaccagcttcatgaggtagtcagtcacctgtaatgcatttcaatttacaggtgtgccttgttaacagttaatttggggaatttctttccttcttaatgtgtttgagccaataagttgtgttgtgacatggtagtggtggtatacagaagagagccctatttggtaaaagaccaagtccatattatgggcaagaaaagctcaaataagcaaagagaaatgagtccatcattactttaagacatgaaggtcaatcaggaacatttcaagaacttttaaagtttcttcaagtgcagtcgcaataaaccatcaagcgctatgatgaaactgtctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctggaggataagttcattagagttaactgcagcccaaataaatgcttcaagaaacagacatctcaacatcaactgttcagaggagactgtgtgaatcaggtcttcgtgattgaattgctgcaaagaaaccactactaaaggacactaataaaaagaagagacttgcttgggacaagaaacacgagcaatggatattagactggtagaaatctgtcaatgggtctgatgagtccaaatttgagatgtctgaaaatagtaaaaatagaaagtcttgaatgagtaggtgtgtccaaacgtgaCTGATACTGTAGTTTCAACCAGATGGTTATTCACGTTGTCATCACAACAAAACATTAATTCCACTGATTGGTTGGTGAATTGACCAACCAGTGAATCACACACAGTCATCTCTCAAAAGGTGATTTATAGAGAAACTCAGGTCCACTTTTAACCAACAGGCAGACATTTTTATATAGGATCATTTCAagtaaaacacacaaacacagatccATGAACAAATGACAAGATAGAGGTTTTTACATGTTCCCAAACAGAGAGGAaaccaaacaacaaaacaaaaaacattggtCACAATAAAGGACCTGTTTCAGAATAAGATGTCCATCACGCCATTGGGCATTTCAGAATGAGAGGATCATTCAGAGCTTCATGTTTCCGACGTAACCTGAGCGACGTGACAATGAAAGTTCCATCCAACCTATAATATATTAGCCATATAGAAATTGGTGAGGGTAAGATGATGGCGTCCGTTTCTGTGGTGACAGCTGGGAGTCACATGACCACAGTTGGATGAGGTGATTGGCCAGGTCAGGGTTGTTCTCAGCCCCACAGCAGACTGGAAGAGAGAAAacaaggtcagaggtcatcttCGTCTGAATGGTa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626198 True 1878 lncRNA 0.40 2 10978353 11005987

Neighbor

gene id symbol gene type direction distance location
LOC110489377 LOC106588728 coding upstream 168954 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 302753 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 309301 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 391916 10578406 ~ 10586437 (+)
LOC110487905 LOC106570604 coding upstream 409623 10541656 ~ 10568730 (+)
LOC110487935 LOC106570554 coding downstream 187063 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 257545 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 547362 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 658013 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 809120 11815107 ~ 11841142 (+)
G2295799 NA non-coding upstream 21988 10956157 ~ 10956365 (+)
G2295733 NA non-coding upstream 70337 10831970 ~ 10908016 (+)
G2295760 NA non-coding upstream 78428 10891529 ~ 10899925 (+)
G2295704 NA non-coding upstream 87272 10834355 ~ 10891081 (+)
G2295759 LOC106570585 non-coding upstream 88823 10889077 ~ 10889530 (+)
G2295813 LOC106570580 non-coding downstream 3188 11009175 ~ 11012661 (+)
G2295826 NA non-coding downstream 11456 11017443 ~ 11060069 (+)
G2295849 NA non-coding downstream 42534 11048521 ~ 11049277 (+)
G2295859 NA non-coding downstream 53426 11059413 ~ 11079190 (+)
G2295866 NA non-coding downstream 62297 11068284 ~ 11090111 (+)
LOC110487904 snrpd1 other upstream 457046 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 654765 10318805 ~ 10323588 (+)
G2294925 NA other upstream 846702 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1640598 9335335 ~ 9337755 (+)
G2294081 NA other upstream 1875167 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 279506 11285493 ~ 11290303 (+)
G2296278 NA other downstream 557560 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 900720 11906205 ~ 11910366 (+)
G2296450 NA other downstream 909209 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2624075 13630062 ~ 13630795 (+)

Expression


Co-expression Network