Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296049 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11125111 ~ 11127387 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626483 | False | 415 | lncRNA | 0.42 | 2 | 11125111 | 11127387 |
| TU2626485 | True | 397 | lncRNA | 0.42 | 2 | 11125734 | 11127387 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il6 | il-6 | coding | upstream | 120675 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 315712 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 449511 | 10670248 ~ 10675600 (+) |
| LOC110487909 | LOC106570592 | coding | upstream | 456059 | 10666690 ~ 10669052 (+) |
| btd | LOC106570600 | coding | upstream | 538674 | 10578406 ~ 10586437 (+) |
| LOC110487935 | LOC106570554 | coding | downstream | 65663 | 11193050 ~ 11234468 (+) |
| LOC118946500 | LOC106570575 | coding | downstream | 136145 | 11262547 ~ 11278404 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 425962 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 536613 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 687720 | 11815107 ~ 11841142 (+) |
| G2296035 | NA | non-coding | upstream | 18839 | 11103707 ~ 11106272 (+) |
| G2296030 | NA | non-coding | upstream | 29667 | 11095233 ~ 11095444 (+) |
| G2295866 | NA | non-coding | upstream | 35000 | 11068284 ~ 11090111 (+) |
| G2295859 | NA | non-coding | upstream | 45921 | 11059413 ~ 11079190 (+) |
| G2295849 | NA | non-coding | upstream | 75834 | 11048521 ~ 11049277 (+) |
| G2296052 | NA | non-coding | downstream | 2351 | 11129738 ~ 11130457 (+) |
| G2296064 | NA | non-coding | downstream | 23824 | 11151211 ~ 11151682 (+) |
| G2296068 | NA | non-coding | downstream | 28339 | 11155726 ~ 11156117 (+) |
| G2296069 | NA | non-coding | downstream | 29002 | 11156389 ~ 11156685 (+) |
| G2296097 | NA | non-coding | downstream | 41868 | 11169255 ~ 11169454 (+) |
| LOC110487904 | snrpd1 | other | upstream | 603804 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 801523 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 993460 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1787356 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 2021925 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 158106 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 436160 | 11563547 ~ 11564590 (+) |
| LOC110487932 | LOC106570557 | other | downstream | 779320 | 11906205 ~ 11910366 (+) |
| G2296450 | NA | other | downstream | 787809 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2502675 | 13630062 ~ 13630795 (+) |
