G2296052


Basic Information

Item Value
gene id G2296052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11129738 ~ 11130457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626488
gagtagggataaagagagagtagggataaagagagagtagggataaagagagagtagggataaagagagagagagtagggatgaagagagagtaggggtaaagagagagagagtagggataaagagagagagagtagggataaagagagagagagagagagtagggatgaagagagagtaggggtaaagagagagagagagtg
>TU2626489
gagtagggataaagagagagtagggataaagagagagtagggataaagagagagtagggataaagagagagagagtagggatgaagagagagtaggggtaaagagagagagagagtagggataaagagagagagagtagggataaagaaagagagagagagagtagggatgaagagagagtaggggtaaagagagagagagagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626488 False 203 lncRNA 0.45 2 11129738 11130457
TU2626489 True 205 lncRNA 0.44 2 11129738 11130457

Neighbor

gene id symbol gene type direction distance location
il6 il-6 coding upstream 125302 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 320339 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 454138 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 460686 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 543301 10578406 ~ 10586437 (+)
LOC110487935 LOC106570554 coding downstream 62593 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 133075 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 422892 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 533543 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 684650 11815107 ~ 11841142 (+)
G2296048 NA non-coding upstream 227 11124222 ~ 11129511 (+)
G2296050 NA non-coding upstream 1912 11126203 ~ 11127826 (+)
G2296049 NA non-coding upstream 2351 11125111 ~ 11127387 (+)
G2296035 NA non-coding upstream 23466 11103707 ~ 11106272 (+)
G2296030 NA non-coding upstream 34294 11095233 ~ 11095444 (+)
G2296064 NA non-coding downstream 20754 11151211 ~ 11151682 (+)
G2296068 NA non-coding downstream 25269 11155726 ~ 11156117 (+)
G2296069 NA non-coding downstream 25932 11156389 ~ 11156685 (+)
G2296097 NA non-coding downstream 38798 11169255 ~ 11169454 (+)
G2296107 NA non-coding downstream 50299 11180756 ~ 11180980 (+)
LOC110487904 snrpd1 other upstream 608431 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 806150 10318805 ~ 10323588 (+)
G2294925 NA other upstream 998087 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1791983 9335335 ~ 9337755 (+)
G2294081 NA other upstream 2026552 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 155036 11285493 ~ 11290303 (+)
G2296278 NA other downstream 433090 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 776250 11906205 ~ 11910366 (+)
G2296450 NA other downstream 784739 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2499605 13630062 ~ 13630795 (+)

Expression


Co-expression Network