G2296107


Basic Information

Item Value
gene id G2296107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11180756 ~ 11180980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626567
GTTCTCTGCTCCCTCACGATGCCAGAGTTCTCTGCTCCCTCACGACGCCAGAGTTCTCTGCTCCCTCACGACGCCAGAGTTCTCTGCTCCCTCACGACGCCAGAGATCTCTGCTCCCTCACGACGCCAGAGATCTCTGCTCCCTCACGACGCCAGAGATCTCTGCTCCCTCACGACGCCAGAGATCTCTGCTCCCTCACGACGCCAGAGATCTCTGCTCCCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626567 True 225 lncRNA 0.61 1 11180756 11180980

Neighbor

gene id symbol gene type direction distance location
il6 il-6 coding upstream 176320 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 371357 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 505156 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 511704 10666690 ~ 10669052 (+)
btd LOC106570600 coding upstream 594319 10578406 ~ 10586437 (+)
LOC110487935 LOC106570554 coding downstream 12070 11193050 ~ 11234468 (+)
LOC118946500 LOC106570575 coding downstream 82552 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 372369 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 483020 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 634127 11815107 ~ 11841142 (+)
G2296097 NA non-coding upstream 11302 11169255 ~ 11169454 (+)
G2296069 NA non-coding upstream 24071 11156389 ~ 11156685 (+)
G2296068 NA non-coding upstream 24639 11155726 ~ 11156117 (+)
G2296064 NA non-coding upstream 29074 11151211 ~ 11151682 (+)
G2296052 NA non-coding upstream 50299 11129738 ~ 11130457 (+)
G2296114 NA non-coding downstream 3828 11184808 ~ 11185097 (+)
G2296139 NA non-coding downstream 54707 11235687 ~ 11236407 (+)
G2296142 NA non-coding downstream 64633 11245613 ~ 11245818 (+)
G2296143 NA non-coding downstream 66103 11247083 ~ 11247416 (+)
LOC110487904 snrpd1 other upstream 659449 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 857168 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1049105 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1843001 9335335 ~ 9337755 (+)
G2294081 NA other upstream 2077570 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 104513 11285493 ~ 11290303 (+)
G2296278 NA other downstream 382567 11563547 ~ 11564590 (+)
LOC110487932 LOC106570557 other downstream 725727 11906205 ~ 11910366 (+)
G2296450 NA other downstream 734216 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2449082 13630062 ~ 13630795 (+)

Expression


Co-expression Network