G2296139


Basic Information

Item Value
gene id G2296139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11235687 ~ 11236407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626605
TTACATAACTGCCAATAAAACACTATACTGTAGGCTTACACAATAAGTGGCAACATGTACTACATGACATACTAGGGAGTGGTTAACACAgagaacaggagaaagagggaggttatcagagagagaaagaaggaggtaatcagagagagagagagagaggtaaactaGAGATCTGGTAGTCTAATAATCCATGTCTAGTCATTCTTTTTATAATCCATCCAACTTTCACCTCTGTTGAGTTTATAGCCTCAAAGTTCTCTTCAGACACTCACGGCTAGGTAGAGATGGCTTTCACCTCTGTTGAGTTTATAGTCTCAAAGTTCTCTTCAGACACTCACGGCTAGGTAGAGATGGGTTTCACCTCTGTTGAGTTTATAGCCTCAAAGTTCTCTTCAGACACTCATGGCTAGGCAGAGATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626605 True 420 lncRNA 0.41 2 11235687 11236407

Neighbor

gene id symbol gene type direction distance location
LOC110487935 LOC106570554 coding upstream 1219 11193050 ~ 11234468 (+)
il6 il-6 coding upstream 231251 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 426288 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 560087 10670248 ~ 10675600 (+)
LOC110487909 LOC106570592 coding upstream 566635 10666690 ~ 10669052 (+)
LOC118946500 LOC106570575 coding downstream 27125 11262547 ~ 11278404 (+)
LOC110487925 LOC106570566 coding downstream 316942 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 427593 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 578700 11815107 ~ 11841142 (+)
LOC110487932 LOC106570557 coding downstream 669798 11906205 ~ 11910366 (+)
G2296114 NA non-coding upstream 50590 11184808 ~ 11185097 (+)
G2296107 NA non-coding upstream 54707 11180756 ~ 11180980 (+)
G2296097 NA non-coding upstream 66233 11169255 ~ 11169454 (+)
G2296069 NA non-coding upstream 79002 11156389 ~ 11156685 (+)
G2296068 NA non-coding upstream 79570 11155726 ~ 11156117 (+)
G2296142 NA non-coding downstream 9206 11245613 ~ 11245818 (+)
G2296143 NA non-coding downstream 10676 11247083 ~ 11247416 (+)
G2296178 NA non-coding downstream 96166 11332573 ~ 11387113 (+)
G2296204 NA non-coding downstream 155779 11392186 ~ 11392574 (+)
LOC110487904 snrpd1 other upstream 714380 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 912099 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1104036 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1897932 9335335 ~ 9337755 (+)
G2294081 NA other upstream 2132501 9094792 ~ 9103186 (+)
G2296150 LOC106570575 other downstream 49086 11285493 ~ 11290303 (+)
G2296278 NA other downstream 327140 11563547 ~ 11564590 (+)
G2296450 NA other downstream 678789 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2393655 13630062 ~ 13630795 (+)

Expression


Co-expression Network