Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11245613 ~ 11245818 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626609 | True | 206 | lncRNA | 0.36 | 1 | 11245613 | 11245818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487935 | LOC106570554 | coding | upstream | 11145 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 241177 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 436214 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 570013 | 10670248 ~ 10675600 (+) |
| LOC110487909 | LOC106570592 | coding | upstream | 576561 | 10666690 ~ 10669052 (+) |
| LOC118946500 | LOC106570575 | coding | downstream | 17714 | 11262547 ~ 11278404 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 307531 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 418182 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 569289 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 660387 | 11906205 ~ 11910366 (+) |
| G2296139 | NA | non-coding | upstream | 9206 | 11235687 ~ 11236407 (+) |
| G2296114 | NA | non-coding | upstream | 60516 | 11184808 ~ 11185097 (+) |
| G2296107 | NA | non-coding | upstream | 64633 | 11180756 ~ 11180980 (+) |
| G2296097 | NA | non-coding | upstream | 76159 | 11169255 ~ 11169454 (+) |
| G2296069 | NA | non-coding | upstream | 88928 | 11156389 ~ 11156685 (+) |
| G2296143 | NA | non-coding | downstream | 1265 | 11247083 ~ 11247416 (+) |
| G2296178 | NA | non-coding | downstream | 86755 | 11332573 ~ 11387113 (+) |
| G2296204 | NA | non-coding | downstream | 146368 | 11392186 ~ 11392574 (+) |
| G2296205 | NA | non-coding | downstream | 147994 | 11393812 ~ 11394057 (+) |
| LOC110487904 | snrpd1 | other | upstream | 724306 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 922025 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1113962 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1907858 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 2142427 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 39675 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 317729 | 11563547 ~ 11564590 (+) |
| G2296450 | NA | other | downstream | 669378 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2384244 | 13630062 ~ 13630795 (+) |
