G2296178


Basic Information

Item Value
gene id G2296178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11332573 ~ 11387113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626650
gagggagagggagagagagggagggagagggagagggagagggagagagagaggcacaaacgacctgagagcacagcaggaaagggagtgattgaaaaagcttcttctactttccccaacgcacaagtggttatctccaccctggtaccacgaaaagacttccaccctgctacaatacagcgggtaaacgcaaCGTGTCTCAAAACCAAACGTTTTCCTGGCCCagcactccaccctggacttgaacagcctttatgaccaggtccacctctacaaggcagcagtgcccagcactccaccctggacttgaacagcctc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626650 True 318 lncRNA 0.54 2 11332573 11387113

Neighbor

gene id symbol gene type direction distance location
LOC118946500 LOC106570575 coding upstream 67707 11262547 ~ 11278404 (+)
LOC110487935 LOC106570554 coding upstream 98105 11193050 ~ 11234468 (+)
il6 il-6 coding upstream 328137 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 523174 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 656973 10670248 ~ 10675600 (+)
LOC110487925 LOC106570566 coding downstream 166236 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 276887 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 427994 11815107 ~ 11841142 (+)
LOC110487932 LOC106570557 coding downstream 519092 11906205 ~ 11910366 (+)
LOC110487934 LOC106570559 coding downstream 544445 11931558 ~ 11959079 (+)
G2296143 NA non-coding upstream 85157 11247083 ~ 11247416 (+)
G2296142 NA non-coding upstream 86755 11245613 ~ 11245818 (+)
G2296139 NA non-coding upstream 96166 11235687 ~ 11236407 (+)
G2296114 NA non-coding upstream 147476 11184808 ~ 11185097 (+)
G2296204 NA non-coding downstream 5073 11392186 ~ 11392574 (+)
G2296205 NA non-coding downstream 6699 11393812 ~ 11394057 (+)
G2296230 NA non-coding downstream 46314 11433427 ~ 11435423 (+)
G2296241 NA non-coding downstream 69885 11456998 ~ 11457422 (+)
G2296244 NA non-coding downstream 83062 11470175 ~ 11470610 (+)
G2296150 LOC106570575 other upstream 42270 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 811266 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 1008985 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1200922 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 1994818 9335335 ~ 9337755 (+)
G2296278 NA other downstream 176434 11563547 ~ 11564590 (+)
G2296450 NA other downstream 528083 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2242949 13630062 ~ 13630795 (+)
G2298739 NA other downstream 2366154 13753267 ~ 13753517 (+)

Expression


Co-expression Network