Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296204 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11392186 ~ 11392574 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626678 | True | 284 | lncRNA | 0.54 | 2 | 11392186 | 11392574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946500 | LOC106570575 | coding | upstream | 127320 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 157718 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 387750 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 582787 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 716586 | 10670248 ~ 10675600 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 160775 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 271426 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 422533 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 513631 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 538984 | 11931558 ~ 11959079 (+) |
| G2296178 | NA | non-coding | upstream | 5073 | 11332573 ~ 11387113 (+) |
| G2296143 | NA | non-coding | upstream | 144770 | 11247083 ~ 11247416 (+) |
| G2296142 | NA | non-coding | upstream | 146368 | 11245613 ~ 11245818 (+) |
| G2296139 | NA | non-coding | upstream | 155779 | 11235687 ~ 11236407 (+) |
| G2296205 | NA | non-coding | downstream | 1238 | 11393812 ~ 11394057 (+) |
| G2296230 | NA | non-coding | downstream | 40853 | 11433427 ~ 11435423 (+) |
| G2296241 | NA | non-coding | downstream | 64424 | 11456998 ~ 11457422 (+) |
| G2296244 | NA | non-coding | downstream | 77601 | 11470175 ~ 11470610 (+) |
| G2296247 | NA | non-coding | downstream | 84978 | 11477552 ~ 11477760 (+) |
| G2296150 | LOC106570575 | other | upstream | 101883 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 870879 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1068598 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1260535 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 2054431 | 9335335 ~ 9337755 (+) |
| G2296278 | NA | other | downstream | 170973 | 11563547 ~ 11564590 (+) |
| G2296450 | NA | other | downstream | 522622 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2237488 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 2360693 | 13753267 ~ 13753517 (+) |
