Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11433427 ~ 11435423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626705 | True | 444 | lncRNA | 0.43 | 2 | 11433427 | 11435423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946500 | LOC106570575 | coding | upstream | 168561 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 198959 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 428991 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 624028 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 757827 | 10670248 ~ 10675600 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 117926 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 228577 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 379684 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 470782 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 496135 | 11931558 ~ 11959079 (+) |
| G2296205 | NA | non-coding | upstream | 39370 | 11393812 ~ 11394057 (+) |
| G2296204 | NA | non-coding | upstream | 40853 | 11392186 ~ 11392574 (+) |
| G2296178 | NA | non-coding | upstream | 46314 | 11332573 ~ 11387113 (+) |
| G2296143 | NA | non-coding | upstream | 186011 | 11247083 ~ 11247416 (+) |
| G2296241 | NA | non-coding | downstream | 21575 | 11456998 ~ 11457422 (+) |
| G2296244 | NA | non-coding | downstream | 34752 | 11470175 ~ 11470610 (+) |
| G2296247 | NA | non-coding | downstream | 42129 | 11477552 ~ 11477760 (+) |
| G2296248 | NA | non-coding | downstream | 43628 | 11479051 ~ 11479333 (+) |
| G2296249 | NA | non-coding | downstream | 45057 | 11480480 ~ 11480783 (+) |
| G2296150 | LOC106570575 | other | upstream | 143124 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 912120 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1109839 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1301776 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 2095672 | 9335335 ~ 9337755 (+) |
| G2296278 | NA | other | downstream | 128124 | 11563547 ~ 11564590 (+) |
| G2296450 | NA | other | downstream | 479773 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2194639 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 2317844 | 13753267 ~ 13753517 (+) |
