G2296241


Basic Information

Item Value
gene id G2296241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11456998 ~ 11457422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626716
TCTTTGGCCTGAGGCATTTACAATCCCATGAATAGCTGCGATTACAGCAGAATAATGTTTATAACCCTCTGTTATAACAGTGACAGCAGGATAATGGTTATAACCCTCTGTTATAACAGTGACAGCAGAATAACCCTCTGTTATAACAGTGACAGCAGAATAATGTTTATAACCCTCTGTTATAACAGTGACAGCAGGATAATGGTTATAACCCTCTGTTATaacagtgacagaaagacacctATTATTGCTCATTGACAGAGTACATGATTGTATCCGCAAACACTTCCATTTGAATTTGTAAAATAATCCTATAAATAAAGTATTCAATGCTCTAGTATTTTATTCTCAGAACCTTCATACAcacggtagcagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626716 True 377 lncRNA 0.36 2 11456998 11457422

Neighbor

gene id symbol gene type direction distance location
LOC118946500 LOC106570575 coding upstream 192132 11262547 ~ 11278404 (+)
LOC110487935 LOC106570554 coding upstream 222530 11193050 ~ 11234468 (+)
il6 il-6 coding upstream 452562 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 647599 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 781398 10670248 ~ 10675600 (+)
LOC110487925 LOC106570566 coding downstream 95927 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 206578 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 357685 11815107 ~ 11841142 (+)
LOC110487932 LOC106570557 coding downstream 448783 11906205 ~ 11910366 (+)
LOC110487934 LOC106570559 coding downstream 474136 11931558 ~ 11959079 (+)
G2296230 NA non-coding upstream 21575 11433427 ~ 11435423 (+)
G2296205 NA non-coding upstream 62941 11393812 ~ 11394057 (+)
G2296204 NA non-coding upstream 64424 11392186 ~ 11392574 (+)
G2296178 NA non-coding upstream 69885 11332573 ~ 11387113 (+)
G2296244 NA non-coding downstream 12753 11470175 ~ 11470610 (+)
G2296247 NA non-coding downstream 20130 11477552 ~ 11477760 (+)
G2296248 NA non-coding downstream 21629 11479051 ~ 11479333 (+)
G2296249 NA non-coding downstream 23058 11480480 ~ 11480783 (+)
G2296253 NA non-coding downstream 35826 11493248 ~ 11493517 (+)
G2296150 LOC106570575 other upstream 166695 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 935691 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 1133410 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1325347 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 2119243 9335335 ~ 9337755 (+)
G2296278 NA other downstream 106125 11563547 ~ 11564590 (+)
G2296450 NA other downstream 457774 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2172640 13630062 ~ 13630795 (+)
G2298739 NA other downstream 2295845 13753267 ~ 13753517 (+)

Expression


Co-expression Network