Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296249 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11480480 ~ 11480783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626725 | True | 304 | lncRNA | 0.50 | 1 | 11480480 | 11480783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946500 | LOC106570575 | coding | upstream | 215614 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 246012 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 476044 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 671081 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 804880 | 10670248 ~ 10675600 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 72566 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 183217 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 334324 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 425422 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 450775 | 11931558 ~ 11959079 (+) |
| G2296248 | NA | non-coding | upstream | 1147 | 11479051 ~ 11479333 (+) |
| G2296247 | NA | non-coding | upstream | 2720 | 11477552 ~ 11477760 (+) |
| G2296244 | NA | non-coding | upstream | 9870 | 11470175 ~ 11470610 (+) |
| G2296241 | NA | non-coding | upstream | 23058 | 11456998 ~ 11457422 (+) |
| G2296230 | NA | non-coding | upstream | 45057 | 11433427 ~ 11435423 (+) |
| G2296253 | NA | non-coding | downstream | 12465 | 11493248 ~ 11493517 (+) |
| G2296256 | NA | non-coding | downstream | 19783 | 11500566 ~ 11500813 (+) |
| G2296259 | NA | non-coding | downstream | 61228 | 11542011 ~ 11543694 (+) |
| G2296282 | mrpl53 | non-coding | downstream | 64531 | 11545314 ~ 11548620 (+) |
| G2296297 | NA | non-coding | downstream | 105992 | 11586775 ~ 11588213 (+) |
| G2296150 | LOC106570575 | other | upstream | 190177 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 959173 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1156892 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1348829 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 2142725 | 9335335 ~ 9337755 (+) |
| G2296278 | NA | other | downstream | 82764 | 11563547 ~ 11564590 (+) |
| G2296450 | NA | other | downstream | 434413 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2149279 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 2272484 | 13753267 ~ 13753517 (+) |
