Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296582 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11481605 ~ 11488380 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2627174 | False | 510 | TUCP | 0.50 | 2 | 11481605 | 11488380 |
| TU2627178 | True | 520 | lncRNA | 0.49 | 3 | 11481605 | 11487510 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487919 | LOC106570575 | coding | downstream | 25612 | 11274255 ~ 11455993 (-) |
| LOC110487914 | cpne4 | coding | downstream | 288635 | 11106026 ~ 11192970 (-) |
| LOC110487917 | LOC106570580 | coding | downstream | 440394 | 11009131 ~ 11041211 (-) |
| LOC110487912 | LOC106588797 | coding | downstream | 529130 | 10868295 ~ 10952475 (-) |
| LOC110487913 | LOC106570587 | coding | downstream | 614464 | 10843932 ~ 10867141 (-) |
| fabph | fabph | coding | upstream | 54690 | 11542200 ~ 11543609 (-) |
| LOC110487921 | mrpl53 | coding | upstream | 57729 | 11545239 ~ 11548738 (-) |
| LOC110487928 | LOC106590894 | coding | upstream | 279784 | 11765257 ~ 11811708 (-) |
| LOC110487933 | LOC106570558 | coding | upstream | 429458 | 11916968 ~ 11929892 (-) |
| LOC110487922 | LOC106570548 | coding | upstream | 631839 | 12119349 ~ 12125244 (-) |
| G2296616 | NA | non-coding | downstream | 1120 | 11480259 ~ 11480485 (-) |
| G2296610 | NA | non-coding | downstream | 14917 | 11466046 ~ 11466688 (-) |
| G2296519 | NA | non-coding | downstream | 27639 | 11447586 ~ 11453966 (-) |
| G2296518 | NA | non-coding | downstream | 35210 | 11444978 ~ 11446395 (-) |
| G2296579 | NA | non-coding | downstream | 97481 | 11383623 ~ 11384124 (-) |
| G2296628 | NA | non-coding | upstream | 24067 | 11511577 ~ 11511890 (-) |
| G2296638 | NA | non-coding | upstream | 45073 | 11532583 ~ 11532801 (-) |
| G2296656 | NA | non-coding | upstream | 81120 | 11568630 ~ 11569914 (-) |
| G2296657 | NA | non-coding | upstream | 90384 | 11577894 ~ 11585558 (-) |
| G2296667 | NA | non-coding | upstream | 135392 | 11622902 ~ 11624243 (-) |
| G2295895 | NA | other | downstream | 693046 | 10788107 ~ 10788559 (-) |
| LOC110489370 | clasp2 | other | downstream | 1271780 | 10205530 ~ 10316136 (-) |
| LOC110487895 | LOC106570596 | other | downstream | 1442956 | 10014678 ~ 10038693 (-) |
| LOC110487885 | LOC106570639 | other | downstream | 1810045 | 9667465 ~ 9705713 (-) |
| LOC110487923 | LOC106588825 | other | upstream | 645108 | 12130756 ~ 12146683 (-) |
| G2298681 | NA | other | upstream | 2163191 | 13650701 ~ 13651184 (-) |
| G2298700 | NA | other | upstream | 2215191 | 13702701 ~ 13702996 (-) |
| G2299075 | NA | other | upstream | 2576369 | 14063879 ~ 14067899 (-) |
| G2302281 | NA | other | upstream | 5783026 | 17270536 ~ 17271016 (-) |
