G2296253


Basic Information

Item Value
gene id G2296253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11493248 ~ 11493517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626730
gtcagaacactgcccttcagggaagtagaccacatgatgcagtccacaccatgtatcaattagatcgtcagcctacatatgctgaggtaacctctggcagaagacccctagaacaatcagagataggagaggtgcgccaactactgcaactaatatgcagactactgagctagacagtccctttaattcacacacgggcacgcgcgcgcacacacacacacacacacacacacacacaaacacacagggttgcagattgcacataaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626730 True 270 lncRNA 0.49 1 11493248 11493517

Neighbor

gene id symbol gene type direction distance location
LOC118946500 LOC106570575 coding upstream 228382 11262547 ~ 11278404 (+)
LOC110487935 LOC106570554 coding upstream 258780 11193050 ~ 11234468 (+)
il6 il-6 coding upstream 488812 11002048 ~ 11004436 (+)
LOC110489377 LOC106588728 coding upstream 683849 10759051 ~ 10809399 (+)
polr1f twistnb coding upstream 817648 10670248 ~ 10675600 (+)
LOC110487925 LOC106570566 coding downstream 59832 11553349 ~ 11656524 (+)
LOC110487927 LOC106588816 coding downstream 170483 11664000 ~ 11742813 (+)
LOC110487931 LOC106570561 coding downstream 321590 11815107 ~ 11841142 (+)
LOC110487932 LOC106570557 coding downstream 412688 11906205 ~ 11910366 (+)
LOC110487934 LOC106570559 coding downstream 438041 11931558 ~ 11959079 (+)
G2296249 NA non-coding upstream 12465 11480480 ~ 11480783 (+)
G2296248 NA non-coding upstream 13915 11479051 ~ 11479333 (+)
G2296247 NA non-coding upstream 15488 11477552 ~ 11477760 (+)
G2296244 NA non-coding upstream 22638 11470175 ~ 11470610 (+)
G2296241 NA non-coding upstream 35826 11456998 ~ 11457422 (+)
G2296256 NA non-coding downstream 7049 11500566 ~ 11500813 (+)
G2296259 NA non-coding downstream 48494 11542011 ~ 11543694 (+)
G2296282 mrpl53 non-coding downstream 51797 11545314 ~ 11548620 (+)
G2296297 NA non-coding downstream 93258 11586775 ~ 11588213 (+)
G2296302 NA non-coding downstream 100006 11593523 ~ 11594319 (+)
G2296150 LOC106570575 other upstream 202945 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 971941 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 1169660 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1361597 10130116 ~ 10131651 (+)
G2294452 LOC106570648 other upstream 2155493 9335335 ~ 9337755 (+)
G2296278 NA other downstream 70030 11563547 ~ 11564590 (+)
G2296450 NA other downstream 421679 11915196 ~ 11977297 (+)
G2298390 NA other downstream 2136545 13630062 ~ 13630795 (+)
G2298739 NA other downstream 2259750 13753267 ~ 13753517 (+)

Expression


Co-expression Network