Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296256 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11500566 ~ 11500813 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626733 | True | 248 | lncRNA | 0.41 | 1 | 11500566 | 11500813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946500 | LOC106570575 | coding | upstream | 235700 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 266098 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 496130 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 691167 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 824966 | 10670248 ~ 10675600 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 52536 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 163187 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 314294 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 405392 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 430745 | 11931558 ~ 11959079 (+) |
| G2296253 | NA | non-coding | upstream | 7049 | 11493248 ~ 11493517 (+) |
| G2296249 | NA | non-coding | upstream | 19783 | 11480480 ~ 11480783 (+) |
| G2296248 | NA | non-coding | upstream | 21233 | 11479051 ~ 11479333 (+) |
| G2296247 | NA | non-coding | upstream | 22806 | 11477552 ~ 11477760 (+) |
| G2296244 | NA | non-coding | upstream | 29956 | 11470175 ~ 11470610 (+) |
| G2296259 | NA | non-coding | downstream | 41198 | 11542011 ~ 11543694 (+) |
| G2296282 | mrpl53 | non-coding | downstream | 44501 | 11545314 ~ 11548620 (+) |
| G2296297 | NA | non-coding | downstream | 85962 | 11586775 ~ 11588213 (+) |
| G2296302 | NA | non-coding | downstream | 92710 | 11593523 ~ 11594319 (+) |
| G2296304 | NA | non-coding | downstream | 93890 | 11594703 ~ 11595368 (+) |
| G2296150 | LOC106570575 | other | upstream | 210263 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 979259 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1176978 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1368915 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 2162811 | 9335335 ~ 9337755 (+) |
| G2296278 | NA | other | downstream | 62734 | 11563547 ~ 11564590 (+) |
| G2296450 | NA | other | downstream | 414383 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2129249 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 2252454 | 13753267 ~ 13753517 (+) |
