Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296321 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11633948 ~ 11634420 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626817 | True | 429 | lncRNA | 0.50 | 2 | 11633948 | 11634420 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946500 | LOC106570575 | coding | upstream | 369082 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 399480 | 11193050 ~ 11234468 (+) |
| il6 | il-6 | coding | upstream | 629512 | 11002048 ~ 11004436 (+) |
| LOC110489377 | LOC106588728 | coding | upstream | 824549 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 958348 | 10670248 ~ 10675600 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 29580 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 180687 | 11815107 ~ 11841142 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 271785 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 297138 | 11931558 ~ 11959079 (+) |
| LOC110489380 | LOC106570560 | coding | downstream | 348871 | 11983291 ~ 12112461 (+) |
| G2296304 | NA | non-coding | upstream | 38580 | 11594703 ~ 11595368 (+) |
| G2296302 | NA | non-coding | upstream | 39629 | 11593523 ~ 11594319 (+) |
| G2296297 | NA | non-coding | upstream | 45735 | 11586775 ~ 11588213 (+) |
| G2296282 | mrpl53 | non-coding | upstream | 85328 | 11545314 ~ 11548620 (+) |
| G2296259 | NA | non-coding | upstream | 90254 | 11542011 ~ 11543694 (+) |
| G2296334 | NA | non-coding | downstream | 109165 | 11743585 ~ 11747039 (+) |
| G2296335 | NA | non-coding | downstream | 125256 | 11759676 ~ 11761155 (+) |
| G2296374 | NA | non-coding | downstream | 128491 | 11762911 ~ 11763220 (+) |
| G2296376 | NA | non-coding | downstream | 130837 | 11765257 ~ 11767609 (+) |
| G2296278 | NA | other | upstream | 69358 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 343645 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 1112641 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1310360 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1502297 | 10130116 ~ 10131651 (+) |
| G2296450 | NA | other | downstream | 280776 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 1995642 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 2118847 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 2379812 | 14014232 ~ 14015587 (+) |
