G2296781


Basic Information

Item Value
gene id G2296781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11841196 ~ 11842086 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627443
TTAGactggtcttttattgtccccagcatgaGGTGTACTTGTgaaattatcatgctgtttaatcagcttcttgatataccacacctgtcaggtggatggattattttggcaaaggagaaatgctcactaacagggatataaacacatttgtgcacaaaatttgagagaaatctgctttttgtgcatatggaacatttctgggatatttttatttcagctcatgaaacatgggaccaacacaagttgcatttatatttttggtcagtgtaTCATGACTGTAGGTTATAGTGAACCATAGTTGTTCTTTCCCCATGTAAACACAACATAGATAAGGACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGGACTGAGTAATAGCTGTTCTTTCTCCATGTAAACACAACATAGATAAGAACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAACATAGATAAGGACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGAACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGGACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGTATAGATAAGAACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGGACTGAGTAATAGCTGTTCTTTCCCCATGTAGACACAGCATAGATAAGGACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGAACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGAACTGAGTAATAGCTGTTCTTTCCCCATGTAAACACAGCATAGATAAGGAGTAATCAGAAATGGGTAAAGAATAGAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106578285 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627443 True 891 lncRNA 0.37 1 11841196 11842086

Neighbor

gene id symbol gene type direction distance location
LOC110487928 LOC106590894 coding downstream 29488 11765257 ~ 11811708 (-)
LOC110487921 mrpl53 coding downstream 292458 11545239 ~ 11548738 (-)
fabph fabph coding downstream 297587 11542200 ~ 11543609 (-)
LOC110487919 LOC106570575 coding downstream 385203 11274255 ~ 11455993 (-)
LOC110487914 cpne4 coding downstream 648226 11106026 ~ 11192970 (-)
LOC110487933 LOC106570558 coding upstream 74882 11916968 ~ 11929892 (-)
LOC110487922 LOC106570548 coding upstream 277263 12119349 ~ 12125244 (-)
LOC110487923 LOC106588825 coding upstream 291530 12130756 ~ 12146683 (-)
LOC110489382 LOC106570512 coding upstream 2161004 14003090 ~ 14039542 (-)
npvf LOC106570543 coding upstream 2202274 14044360 ~ 14049475 (-)
G2296777 NA non-coding downstream 525 11840259 ~ 11840671 (-)
G2296764 NA non-coding downstream 18034 11822606 ~ 11823162 (-)
G2296757 NA non-coding downstream 35901 11799397 ~ 11805295 (-)
G2296747 NA non-coding downstream 55420 11785252 ~ 11785776 (-)
G2296806 NA non-coding upstream 49836 11891922 ~ 11894885 (-)
G2296778 NA non-coding upstream 66875 11908961 ~ 11910574 (-)
G2296855 NA non-coding upstream 144342 11986428 ~ 11988441 (-)
G2296950 NA non-coding upstream 178532 12020618 ~ 12020976 (-)
G2296951 NA non-coding upstream 179105 12021191 ~ 12021456 (-)
G2296582 NA other downstream 352816 11481605 ~ 11488380 (-)
G2295895 NA other downstream 1052637 10788107 ~ 10788559 (-)
LOC110489370 clasp2 other downstream 1631371 10205530 ~ 10316136 (-)
LOC110487895 LOC106570596 other downstream 1802547 10014678 ~ 10038693 (-)
G2298681 NA other upstream 1808615 13650701 ~ 13651184 (-)
G2298700 NA other upstream 1860615 13702701 ~ 13702996 (-)
G2299075 NA other upstream 2221793 14063879 ~ 14067899 (-)
G2302281 NA other upstream 5428450 17270536 ~ 17271016 (-)

Expression

G2296781 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G2296781 Expression in each Bioproject

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G2296781 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network