G2296410


Basic Information

Item Value
gene id G2296410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11883484 ~ 11911337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626939
ggggactatgtcagtggtacagatggaactatccaagcagaagataaatCCCCTTCAAATGTTGGTTTTTGGTTGCGTTACCAACCAAACGCAATTCAATATAACTGTTGAAATACAGTAAATATCCTGataacttgtcgacaagttaacaAATGATAGGTTGGgttcacgtctccaactcaaccaaaaatcaaagttaaagaatgggattaagtcagtggctcagatggaactatgcaagcagtagatacatctcctttaaatgttgatatttgtctCTCTTATTAGAGGAATCACAGTGCTAACAGATTAATCagttgtataaataaacaaaacacctGACATTTTATTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626939 True 354 lncRNA 0.36 2 11883484 11911337

Neighbor

gene id symbol gene type direction distance location
LOC110487931 LOC106570561 coding upstream 42342 11815107 ~ 11841142 (+)
LOC110487927 LOC106588816 coding upstream 140671 11664000 ~ 11742813 (+)
LOC110487925 LOC106570566 coding upstream 226960 11553349 ~ 11656524 (+)
LOC118946500 LOC106570575 coding upstream 618618 11262547 ~ 11278404 (+)
LOC110487935 LOC106570554 coding upstream 649016 11193050 ~ 11234468 (+)
LOC110487934 LOC106570559 coding downstream 20221 11931558 ~ 11959079 (+)
LOC110489380 LOC106570560 coding downstream 71954 11983291 ~ 12112461 (+)
LOC110487924 LOC106570549 coding downstream 235341 12146678 ~ 12153737 (+)
col8a2 LOC106570550 coding downstream 411534 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 513706 12425043 ~ 12472248 (+)
G2296376 NA non-coding upstream 115875 11765257 ~ 11767609 (+)
G2296374 NA non-coding upstream 120264 11762911 ~ 11763220 (+)
G2296335 NA non-coding upstream 122329 11759676 ~ 11761155 (+)
G2296334 NA non-coding upstream 136445 11743585 ~ 11747039 (+)
G2296450 NA non-coding downstream 3859 11915196 ~ 11977297 (+)
G2296481 NA non-coding downstream 73035 11984372 ~ 11987635 (+)
G2296869 NA non-coding downstream 99611 12010948 ~ 12011147 (+)
G2296870 NA non-coding downstream 101955 12013292 ~ 12013605 (+)
G2296875 NA non-coding downstream 112988 12024325 ~ 12024575 (+)
G2296278 NA other upstream 318894 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 593181 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1362177 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 1559896 10318805 ~ 10323588 (+)
G2294925 NA other upstream 1751833 10130116 ~ 10131651 (+)
G2298390 NA other downstream 1718725 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1841930 13753267 ~ 13753517 (+)
G2298884 NA other downstream 2102895 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 2295829 14207166 ~ 14225549 (+)

Expression


Co-expression Network