Gene
RNA
| Item | Value |
|---|---|
| gene id | G2296443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11891931 ~ 11894859 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2626975 | True | 379 | lncRNA | 0.41 | 2 | 11891931 | 11894859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487931 | LOC106570561 | coding | upstream | 50789 | 11815107 ~ 11841142 (+) |
| LOC110487927 | LOC106588816 | coding | upstream | 149118 | 11664000 ~ 11742813 (+) |
| LOC110487925 | LOC106570566 | coding | upstream | 235407 | 11553349 ~ 11656524 (+) |
| LOC118946500 | LOC106570575 | coding | upstream | 627065 | 11262547 ~ 11278404 (+) |
| LOC110487935 | LOC106570554 | coding | upstream | 657463 | 11193050 ~ 11234468 (+) |
| LOC110487932 | LOC106570557 | coding | downstream | 11346 | 11906205 ~ 11910366 (+) |
| LOC110487934 | LOC106570559 | coding | downstream | 36699 | 11931558 ~ 11959079 (+) |
| LOC110489380 | LOC106570560 | coding | downstream | 88432 | 11983291 ~ 12112461 (+) |
| LOC110487924 | LOC106570549 | coding | downstream | 251819 | 12146678 ~ 12153737 (+) |
| col8a2 | LOC106570550 | coding | downstream | 428012 | 12322871 ~ 12414149 (+) |
| G2296376 | NA | non-coding | upstream | 124322 | 11765257 ~ 11767609 (+) |
| G2296374 | NA | non-coding | upstream | 128711 | 11762911 ~ 11763220 (+) |
| G2296335 | NA | non-coding | upstream | 130776 | 11759676 ~ 11761155 (+) |
| G2296334 | NA | non-coding | upstream | 144892 | 11743585 ~ 11747039 (+) |
| G2296448 | NA | non-coding | downstream | 6660 | 11901519 ~ 11962202 (+) |
| G2296450 | NA | non-coding | downstream | 20337 | 11915196 ~ 11977297 (+) |
| G2296481 | NA | non-coding | downstream | 89513 | 11984372 ~ 11987635 (+) |
| G2296869 | NA | non-coding | downstream | 116089 | 12010948 ~ 12011147 (+) |
| G2296278 | NA | other | upstream | 327341 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 601628 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 1370624 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 1568343 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 1760280 | 10130116 ~ 10131651 (+) |
| G2298390 | NA | other | downstream | 1735203 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 1858408 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 2119373 | 14014232 ~ 14015587 (+) |
