G2296450


Basic Information

Item Value
gene id G2296450
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11915196 ~ 11977297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2626989
ATCATTCACAGAACCCCAAACCTTTAATTACCACAGCTTGCTCACAAAGATATATGTGGAGGGGGGAAACAcacaaacaggaagagagagagacagccaggttCATCACCACAGACAGGAAGCTGTGAAGTCGCAGACAGGACCCTGTGATGTCCCAGACAGGACCCTGTGATGTCCCAGACAGGACGGTGTGATGTCACAGACAGGATGTTGCGATGTCTCAGACAGGACGCTGTGATGTCATTAGTATGTGACGGACGGTTGGATATACAGCTCCAACCTCCTGGCTGGTATAATAAGCTCTAAACCAGAGAAACAGCACAGGCGCACGCACATCCACCCACCCCTACTGAAacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctaacacacatccacccacccttacagaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctcacacacatccacccaccccTACTGAAACatgcacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacatccacccactcctactgaaacatacacactctctcacatACATCCACCCACTCCTACTGAAacATACACCCTTTGTCTTCCATTGTCATGTCAGGATCTTCTAGATGTTATTATATGTCTGTGTTGGTTGTTTTCTTACGTCTTAATGTTGCCTACTTGTTCTCCTGTGCCATAGTTTGCCGTACACAGTTAAGAGACGACGGTACAATGACTCATTCTCAATAGTGAGAGAGTCAAACTATGATTCTCCATAGAGAGTGAAACCTCTGTAGTAGCATTTGGCTTGGTTCCTCTGTGGCACAACATGAAAGAGCTGAGAGGGCCCATTAGCCTGTTTAAGGACATGGATGTTACTTAGTGATCTACCATTGCTTAAGCGTTAACCGCTATATGAGCTTGTAGCATTCTAGGCACGATTACATTATCTACACGTCTAAGatggtacatacagtacatgctgaGAGAGTGATTGACAGATGACGCAGGGGGTCTTGGGAACGAGAAAGGACCATAACACCCCTCTGTGACATCACGGTATGAACCAAGGATGTCATGTGACTTCTGCGATGCCCAACTGACAGATTTTTTAGCAAGCTCCTCTTAAACAACATGTCGTGTTTGCCAAATTCCTCAGTCTGTGTATGCGTGTGCGCTTGCATGTGTGTGAATGAACTAATCTATGCAAGAGAGTgggagaacagacagacagacaggagagaatcGGCTCATAAAAGCTATAGTATTCTCCTGATGTCTAGCTAGTCTCTCTCCTGGAAGTCAATGAGCAGCCTGTATTATCATCATccccacactgactgactgactgactgactgactgactgactgacacagaaACAAACATGGTCAGAAAATAACCAGCGCAAACGCACGTCGGCTAGCTGGCGAACTCACAACAACACAGAAGCCTTATAGTACGAGAGAAACTGCAAACGATTTTTGtttgagaaaaaaataaaataaaagtacatCCATAGATAGAGAAAATGCTAAAATGGCACACTGCAATACTTCTGCTGTACTATCCTACTGTATATAACAAAAACATAAGTATTTACAAAAAACAATACCCACTATAACTTGGTTGGCTTTTCATCTTTTCTTTTTTCAGCATTTGAAATCGAGCAAAAACATTATTTattagggagggggggggtgacaTTTTGGTCGTTTTTTTTGCAATCCCCCCATTTGCTAATGCTGTTGGTGTGGGGTGCCGGTGGGTCCTCCACCTCACTCTGGGGGGGGTCTTCTGACGCTGGGGGTGCTGTAGAAGTGGGGTTGTCAGGGGAGTCCCTTGGGAGGGGGCGGAGGAGTACAGGGTACAGGAGGGTGGCTGTAGGGGGGGGGGTACGATGGTTTGTGGCGCCCCACGCCTGCTCACGCTGTCAGCTCTTCCCTCAGCTCTTTGTTCCTGCGCACCACCTGGGCATGCCTCTCCTTCTCCTCTGCCATCTTGCTGAAGTTGCTGTTCTCCTCCATGGCCTTCATCACCACGTCTCTCTCGTGCTCCCGCTTTTCTGCCAGGGCCCTGAGAACCTGGGCCTCCTGGGACTGAAGCGgtgatagaatagaat
>TU2626990
ATCATTCACAGAACCCCAAACCTTTAATTACCACAGCTTGCTCACAAAGATATATGTGGAGGGGGGAAACAcacaaacaggaagagagagagacagccaggttCATCACCACAGACAGGAAGCTGTGAAGTCGCAGACAGGACCCTGTGATGTCCCAGACAGGACCCTGTGATGTCCCAGACAGGACGGTGTGATGTCACAGACAGGATGTTGCGATGTCTCAGACAGGACGCTGTGATGTCATTAGTATGTGACGGACGGTTGGATATACAGCTCCAACCTCCTGGCTGGTATAATAAGCTCTAAACCAGAGAAACAGCACAGGCGCACGCACATCCACCCACCCCTACTGAAacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctcacacacatccacccaccccTACTGAAACatgcacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacATCCACCCACTCCTACTGAAacatacacactctctcacatACATCCACCCACTCCTACTGAAacatacacactctctcacacacatccacccaccccTACTGAAACATACACCCTTTGTCTTCCATTGTCATGTCAGGATCTTCTAGATGTTATTATATGTCTGTGTTGGTTGTTTTCTTACGTCTTAATGTTGCCTACTTGTTCTCCTGTGCCATAGTTTGCCGTACACAGTTAAGAGACGACGGTACAATGACTCATTCTCAATAGTGAGAGAGTCAAACTATGATTCTCCATAGAGAGTGAAACCTCTGTAGTAGCATTTGGCTTGGTTCCTCTGTGGCACAACATGAAAGAGCTGAGAGGGCCCATTAGCCTGTTTAAGGACATGGATGTTACTTAGTGATCTACCATTGCTTAAGCGTTAACCGCTATATGAGCTTGTAGCATTCTAGGCACGATTACATTATCTACACGTCTAAGatggtacatacagtacatgctgaGAGAGTGATTGACAGATGACGCAGGGGGTCTTGGGAACGAGAAAGGACCATAACACCCCTCTGTGACATCACGGTATGAACCAAGGATGTCATGTGACTTCTGCGATGCCCAACTGACAGATTTTTTAGCAAGCTCCTCTTAAACAACATGTCGTGTTTGCCAAATTCCTCAGTCTGTGTATGCGTGTGCGCTTGCATGTGTGTGAATGAACTAATCTATGCAAGAGAGTgggagaacagacagacagacaggagagaatcGGCTCATAAAAGCTATAGTATTCTCCTGATGTCTAGCTAGTCTCTCTCCTGGAAGTCAATGAGCAGCCTGTATTATCATCATccccacactgactgactgactgactgactgactgactgactgacacagaaACAAACATGGTCAGAAAATAACCAGCGCAAACGCACGTCGGCTAGCTGGCGAACTCACAACAACACAGAAGCCTTATAGTACGAGAGAAACTGCAAACGATTTTTGtttgagaaaaaaataaaataaaagtacatCCATAGATAGAGAAAATGCTAAAATGGCACACTGCAATACTTCTGCTGTACTATCCTACTGTATATAACAAAAACATAAGTATTTACAAAAAACAATACCCACTATAACTTGGTTGGCTTTTCATCTTTTCTTTTTTCAGCATTTGAAATCGAGCAAAAACATTATTTattagggaggggggggTGACATTTTGACAAATAAACTGACCAACTTGATACAGTCCAGCCACAGGACTGAGTTGAGGGTTTTTAAAAGGAAATCCTTGTTGGTGTTTCCTACCTTCGTTTGTAGCTTACAGG
>TU2626991
ATCATTCACAGAACCCCAAACCTTTAATTACCACAGCTTGCTCACAAAGATATATGTGGAGGGGGGAAACAcacaaacaggaagagagagagacagccaggttCATCACCACAGACAGGAAGCTGTGAAGTCGCAGACAGGACCCTGTGATGTCCCAGACAGGACCCTGTGATGTCCCAGACAGGACGGTGTGATGTCACAGACAGGATGTTGCGATGTCTCAGACAGGACGCTGTGATGTCATTAGTATGTGACGGACGGTTGGATATACAGCTCCAACCTCCTGGCTGGTATAATAAGCTCTAAACCAGAGAAACAGCACAGGCGCACGCACATCCACCCACCCCTACTGAAacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctaacacacatccacccacccttacagaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctcacacacatccacccaccccTACTGAAACatgcacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacatccacccactcctactgaaacatacacactctctcacatACATCCACCCACTCCTACTGAAacATACACCCTTTGTCTTCCATTGTCATGTCAGGATCTTCTAGATGTTATTATATGTCTGTGTTGGTTGTTTTCTTACGTCTTAATGTTGCCTACTTGTTCTCCTGTGCCATAGTTTGCCGTACACAGTTAAGAGACGACGGTACAATGACTCATTCTCAATAGTGAGAGAGTCAAACTATGATTCTCCATAGAGAGTGAAACCTCTGTAGTAGCATTTGGCTTGGTTCCTCTGTGGCACAACATGAAAGAGCTGAGAGGGCCCATTAGCCTGTTTAAGGACATGGATGTTACTTAGTGATCTACCATTGCTTAAGCGTTAACCGCTATATGAGCTTGTAGCATTCTAGGCACGATTACATTATCTACACGTCTAAGatggtacatacagtacatgctgaGAGAGTGATTGACAGATGACGCAGGGGGTCTTGGGAACGAGAAAGGACCATAACACCCCTCTGTGACATCACGGTATGAACCAAGGATGTCATGTGACTTCTGCGATGCCCAACTGACAGATTTTTTAGCAAGCTCCTCTTAAACAACATGTCGTGTTTGCCAAATTCCTCAGTCTGTGTATGCGTGTGCGCTTGCATGTGTGTGAATGAACTAATCTATGCAAGAGAGTgggagaacagacagacagacaggagagaatcGGCTCATAAAAGCTATAGTATTCTCCTGATGTCTAGCTAGTCTCTCTCCTGGAAGTCAATGAGCAGCCTGTATTATCATCATccccacactgactgactgactgactgactgactgactgactgacacagaaACAAACATGGTCAGAAAATAACCAGCGCAAACGCACGTCGGCTAGCTGGCGAACTCACAACAACACAGAAGCCTTATAGTACGAGAGAAACTGCAAACGATTTTTGtttgagaaaaaaataaaataaaagtacatCCATAGATAGAGAAAATGCTAAAATGGCACACTGCAATACTTCTGCTGTACTATCCTACTGTATATAACAAAAACATAAGTATTTACAAAAAACAATACCCACTATAACTTGGTTGGCTTTTCATCTTTTCTTTTTTCAGCATTTGAAATCGAGCAAAAACATTATTTattagggaggggggggTGACATTTTGACAAATAAACTGACCAACTTGATACAGTCCAGCCACAGGACTGAGTTGAGGGTTTTTAAAAGGAAATCCTTGTTGGTGTTTCCTACCTTCGTTTGTAGCTTACAGG
>TU2626992
ATCATTCACAGAACCCCAAACCTTTAATTACCACAGCTTGCTCACAAAGATATATGTGGAGGGGGGAAACAcacaaacaggaagagagagagacagccaggttCATCACCACAGACAGGAAGCTGTGAAGTCGCAGACAGGACCCTGTGATGTCCCAGACAGGACCCTGTGATGTCCCAGACAGGACGGTGTGATGTCACAGACAGGATGTTGCGATGTCTCAGACAGGACGCTGTGATGTCATTAGTATGTGACGGACGGTTGGATATACAGCTCCAACCTCCTGGCTGGTATAATAAGCTCTAAACCAGAGAAACAGCACAGGCGCACGCACATCCACCCACCCCTACTGAAacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctaacacacatccacccacccttacagaaacatacacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacccttaCTGAAAcatgcactctctcacacacatccacccacccttactgaaacatacacactctctcacacacatccacccaccccTACTGAAACatgcacactctctcacacacatccacccacccctactgaaacatacacactctctcacacacATCCACCCACTCCTACTGAAacatacacactctctcacatACATCCACCCACTCCTACTGAAacatacacactctctcacacacatccacccaccccTACTGAAACATACACCCTTTGTCTTCCATTGTCATGTCAGGATCTTCTAGATGTTATTATATGTCTGTGTTGGTTGTTTTCTTACGTCTTAATGTTGCCTACTTGTTCTCCTGTGCCATAGTTTGCCGTACACAGTTAAGAGACGACGGTACAATGACTCATTCTCAATAGTGAGAGAGTCAAACTATGATTCTCCATAGAGAGTGAAACCTCTGTAGTAGCATTTGGCTTGGTTCCTCTGTGGCACAACATGAAAGAGCTGAGAGGGCCCATTAGCCTGTTTAAGGACATGGATGTTACTTAGTGATCTACCATTGCTTAAGCGTTAACCGCTATATGAGCTTGTAGCATTCTAGGCACGATTACATTATCTACACGTCTAAGatggtacatacagtacatgctgaGAGAGTGATTGACAGATGACGCAGGGGGTCTTGGGAACGAGAAAGGACCATAACACCCCTCTGTGACATCACGGTATGAACCAAGGATGTCATGTGACTTCTGCGATGCCCAACTGACAGATTTTTTAGCAAGCTCCTCTTAAACAACATGTCGTGTTTGCCAAATTCCTCAGTCTGTGTATGCGTGTGCGCTTGCATGTGTGTGAATGAACTAATCTATGCAAGAGAGTgggagaacagacagacagacaggagagaatcGGCTCATAAAAGCTATAGTATTCTCCTGATGTCTAGCTAGTCTCTCTCCTGGAAGTCAATGAGCAGCCTGTATTATCATCATccccacactgactgactgactgactgactgactgactgactgacacagaaACAAACATGGTCAGAAAATAACCAGCGCAAACGCACGTCGGCTAGCTGGCGAACTCACAACAACACAGAAGCCTTATAGTACGAGAGAAACTGCAAACGATTTTTGtttgagaaaaaaataaaataaaagtacatCCATAGATAGAGAAAATGCTAAAATGGCACACTGCAATACTTCTGCTGTACTATCCTACTGTATATAACAAAAACATAAGTATTTACAAAAAACAATACCCACTATAACTTGGTTGGCTTTTCATCTTTTCTTTTTTCAGCATTTGAAATCGAGCAAAAACATTATTTattagggagggggggggtgacaTTTTGGTCGTTTTTTTTGCAATCCCCCCATTTGCTAATGCTGTTGGTGTGGGGTGCCGGTGGGTCCTCCACCTCACTCTGGGGGGGGTCTTCTGACGCTGGGGGTGCTGTAGAAGTGGGGTTGTCAGGGGAGTCCCTTGGGAGGGGGCGGAGGAGTACAGGGTACAGGAGGGTGGCTGTAGGGGGGGGGGTACGATGGTTTGTGGCGCCCCACGCCTGCTCACGCTGTCAGCTCTTCCCTCAGCTCTTTGTTCCTGCGCACCACCTGGGCATGCCTCCTTCTCCTGCAGGCGCTCCATGATGGAGGCCAGGTAGGCCTGGCGGTTCTCCTTGATCTGCTCCATCTTCATGGTCAGCTTCTCCTCTGCCATCTTGCTGAAGTTGCTGTTCTCCTCCATGGCCTTCATCACCACGTCTCTCTCGTGCTCCCGCTTTTCTGCCAGGGCCCTGAGAACCTGGGCCTCCTGGGACTGAAGCGgtgatagaatagaat

Function

NR:

description
PREDICTED: stathmin-2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2626989 False 2326 TUCP 0.47 4 11915196 11918140
TU2626990 False 1906 lncRNA 0.44 4 11915196 11977297
TU2626991 False 2020 lncRNA 0.45 4 11915196 11977297
TU2626992 True 2402 lncRNA 0.48 4 11915196 11918140

Neighbor

gene id symbol gene type direction distance location
LOC110487932 LOC106570557 coding upstream 5565 11906205 ~ 11910366 (+)
LOC110487931 LOC106570561 coding upstream 74054 11815107 ~ 11841142 (+)
LOC110487927 LOC106588816 coding upstream 172383 11664000 ~ 11742813 (+)
LOC110487925 LOC106570566 coding upstream 258672 11553349 ~ 11656524 (+)
LOC118946500 LOC106570575 coding upstream 650330 11262547 ~ 11278404 (+)
LOC110489380 LOC106570560 coding downstream 5994 11983291 ~ 12112461 (+)
LOC110487924 LOC106570549 coding downstream 169381 12146678 ~ 12153737 (+)
col8a2 LOC106570550 coding downstream 345574 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 447746 12425043 ~ 12472248 (+)
LOC118946451 adgrb2 coding downstream 1296923 13274220 ~ 13491588 (+)
G2296410 NA non-coding upstream 3859 11883484 ~ 11911337 (+)
G2296443 NA non-coding upstream 20337 11891931 ~ 11894859 (+)
G2296376 NA non-coding upstream 147587 11765257 ~ 11767609 (+)
G2296481 NA non-coding downstream 7075 11984372 ~ 11987635 (+)
G2296869 NA non-coding downstream 33651 12010948 ~ 12011147 (+)
G2296870 NA non-coding downstream 35995 12013292 ~ 12013605 (+)
G2296875 NA non-coding downstream 47028 12024325 ~ 12024575 (+)
G2296883 NA non-coding downstream 59987 12037284 ~ 12037485 (+)
G2296278 NA other upstream 350606 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 624893 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1393889 10509464 ~ 10521398 (+)
LOC118946540 NA other upstream 1591608 10318805 ~ 10323588 (+)
G2298390 NA other downstream 1652765 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1775970 13753267 ~ 13753517 (+)
G2298884 NA other downstream 2036935 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 2229869 14207166 ~ 14225549 (+)
G2299191 NA other downstream 2326439 14303736 ~ 14304232 (+)
LOC110487934 LOC106570559 coding downstream 13418 11931558 ~ 11959079 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location