G2296481


Basic Information

Item Value
gene id G2296481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 11984372 ~ 11987635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627025
acagggatgtagtggtggagtctggttgtacagcgatgtagtggtggagtctggttaTACAtggatgtagtggtggagtctggttatacagggatgtagtggtggagtctggttatacagggatgtagtggtggagtctggttatacagggatgtagtggtggagtctggttatACAGGGATGTAGATTTAGTGGTGTAGTCTGGTTATACAGGGATAtagtggtggagtctggttatacagggatgtagtggtagagtctggttgtacagggatgtagtggtggagtctggttatacagggatgtagtggtggagtctggttgtacagggatgtagtggtggagtctggttgtACAGGGATGTAGTGTAGTTGTGTAGTCTGTTTAtacagggatgtagtggtggagtctggagaTAAATTATTGTAGCTGTTTAGTCTGGATATAAATtgatgtagtggtggagtctggttaTACAGGGATGTAGTGGTGTAGTCTGGAGATAAAGGATAtagtggtggagtctggttgtACAGGGATGTAGATTTAGTGGTGGATTCTGGTTAtacagggatgtagtggtggagtctggagaTAAAGGGACGTagtgtagtggtggagtctggttaTACTGtgatgtagtggtggagtctggttaTACTGtgatgtagtggtggagtctggttgtacagggatgtagtggtggagtctggttgtACATGGATGTAGTGGGGGAGTCTGGAGATAATGTGATAtagtggtggagtctggttgtACAGGGATGTAGTGAGGGAGTCTGGTTGTACTGTGATGTAGTGGGGGAGTCTGGTTGTGcagggatgtag

Function

NR:

description
PREDICTED: phospholysine phosphohistidine inorganic pyrophosphate phosphatase-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627025 True 845 lncRNA 0.47 3 11984372 11987635

Neighbor

gene id symbol gene type direction distance location
LOC110487934 LOC106570559 coding upstream 25293 11931558 ~ 11959079 (+)
LOC110487932 LOC106570557 coding upstream 74741 11906205 ~ 11910366 (+)
LOC110487931 LOC106570561 coding upstream 143230 11815107 ~ 11841142 (+)
LOC110487927 LOC106588816 coding upstream 241559 11664000 ~ 11742813 (+)
LOC110487925 LOC106570566 coding upstream 327848 11553349 ~ 11656524 (+)
LOC110487924 LOC106570549 coding downstream 159043 12146678 ~ 12153737 (+)
col8a2 LOC106570550 coding downstream 335236 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 437408 12425043 ~ 12472248 (+)
LOC118946451 adgrb2 coding downstream 1286585 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 1519953 13507588 ~ 13724989 (+)
G2296450 NA non-coding upstream 7075 11915196 ~ 11977297 (+)
G2296448 NA non-coding upstream 22170 11901519 ~ 11962202 (+)
G2296410 NA non-coding upstream 73035 11883484 ~ 11911337 (+)
G2296443 NA non-coding upstream 89513 11891931 ~ 11894859 (+)
G2296869 NA non-coding downstream 23313 12010948 ~ 12011147 (+)
G2296870 NA non-coding downstream 25657 12013292 ~ 12013605 (+)
G2296875 NA non-coding downstream 36690 12024325 ~ 12024575 (+)
G2296883 NA non-coding downstream 49649 12037284 ~ 12037485 (+)
G2296920 NA non-coding downstream 131737 12119372 ~ 12120455 (+)
G2296278 NA other upstream 419782 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 694069 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1463065 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1642427 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1765632 13753267 ~ 13753517 (+)
G2298884 NA other downstream 2026597 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 2219531 14207166 ~ 14225549 (+)
G2299191 NA other downstream 2316101 14303736 ~ 14304232 (+)

Expression


Co-expression Network