G2296870


Basic Information

Item Value
gene id G2296870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12013292 ~ 12013605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627542
caatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacagacctctgagattatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcgtcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627542 True 314 lncRNA 0.42 1 12013292 12013605

Neighbor

gene id symbol gene type direction distance location
LOC110487934 LOC106570559 coding upstream 54213 11931558 ~ 11959079 (+)
LOC110487932 LOC106570557 coding upstream 103661 11906205 ~ 11910366 (+)
LOC110487931 LOC106570561 coding upstream 172150 11815107 ~ 11841142 (+)
LOC110487927 LOC106588816 coding upstream 270479 11664000 ~ 11742813 (+)
LOC110487925 LOC106570566 coding upstream 356768 11553349 ~ 11656524 (+)
LOC110487924 LOC106570549 coding downstream 133073 12146678 ~ 12153737 (+)
col8a2 LOC106570550 coding downstream 309266 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 411438 12425043 ~ 12472248 (+)
LOC118946451 adgrb2 coding downstream 1260615 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 1493983 13507588 ~ 13724989 (+)
G2296869 NA non-coding upstream 2145 12010948 ~ 12011147 (+)
G2296481 NA non-coding upstream 25657 11984372 ~ 11987635 (+)
G2296450 NA non-coding upstream 35995 11915196 ~ 11977297 (+)
G2296448 NA non-coding upstream 51090 11901519 ~ 11962202 (+)
G2296875 NA non-coding downstream 10720 12024325 ~ 12024575 (+)
G2296883 NA non-coding downstream 23679 12037284 ~ 12037485 (+)
G2296920 NA non-coding downstream 105767 12119372 ~ 12120455 (+)
G2296941 NA non-coding downstream 161901 12175506 ~ 12176079 (+)
G2297039 NA non-coding downstream 220900 12234505 ~ 12235139 (+)
G2296278 NA other upstream 448702 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 722989 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1491985 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1616457 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1739662 13753267 ~ 13753517 (+)
G2298884 NA other downstream 2000627 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 2193561 14207166 ~ 14225549 (+)
G2299191 NA other downstream 2290131 14303736 ~ 14304232 (+)

Expression


Co-expression Network