G2296875


Basic Information

Item Value
gene id G2296875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12024325 ~ 12024575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627550
GTACTTGTAGGCCTATATAATAGTAGTGTACCTGTACTTGTAGGCCTATATAATAGTAGTGTACCTGTACTTGTAGGCCTATATAATAGTAGTGTACCTGTACTTGTAGGCCTATATATTAGTAGTGTACCTATACTTGTAGGCCTATATAATAGTAGTGTACCTGTACTTGTAGGCCTATATAATAGTAGTGTACCTGTACTTGTAGGCCTATATATTAGTAGTGTACCTGTACTTGTAGGCCTATATGT

Function

NR:

description
snRNA-activating protein complex subunit 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627550 True 251 lncRNA 0.36 1 12024325 12024575

Neighbor

gene id symbol gene type direction distance location
LOC110487934 LOC106570559 coding upstream 65246 11931558 ~ 11959079 (+)
LOC110487932 LOC106570557 coding upstream 114694 11906205 ~ 11910366 (+)
LOC110487931 LOC106570561 coding upstream 183183 11815107 ~ 11841142 (+)
LOC110487927 LOC106588816 coding upstream 281512 11664000 ~ 11742813 (+)
LOC110487925 LOC106570566 coding upstream 367801 11553349 ~ 11656524 (+)
LOC110487924 LOC106570549 coding downstream 122103 12146678 ~ 12153737 (+)
col8a2 LOC106570550 coding downstream 298296 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 400468 12425043 ~ 12472248 (+)
LOC118946451 adgrb2 coding downstream 1249645 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 1483013 13507588 ~ 13724989 (+)
G2296870 NA non-coding upstream 10720 12013292 ~ 12013605 (+)
G2296869 NA non-coding upstream 13178 12010948 ~ 12011147 (+)
G2296481 NA non-coding upstream 36690 11984372 ~ 11987635 (+)
G2296450 NA non-coding upstream 47028 11915196 ~ 11977297 (+)
G2296448 NA non-coding upstream 62123 11901519 ~ 11962202 (+)
G2296883 NA non-coding downstream 12709 12037284 ~ 12037485 (+)
G2296920 NA non-coding downstream 94797 12119372 ~ 12120455 (+)
G2296941 NA non-coding downstream 150931 12175506 ~ 12176079 (+)
G2297039 NA non-coding downstream 209930 12234505 ~ 12235139 (+)
G2297045 NA non-coding downstream 214693 12239268 ~ 12301910 (+)
G2296278 NA other upstream 459735 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 734022 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1503018 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1605487 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1728692 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1989657 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 2182591 14207166 ~ 14225549 (+)
G2299191 NA other downstream 2279161 14303736 ~ 14304232 (+)

Expression


Co-expression Network