Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297045 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12239268 ~ 12301910 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2627760 | True | 291 | lncRNA | 0.41 | 4 | 12239268 | 12301910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487924 | LOC106570549 | coding | upstream | 85531 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 126807 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 280189 | 11931558 ~ 11959079 (+) |
| LOC110487932 | LOC106570557 | coding | upstream | 329637 | 11906205 ~ 11910366 (+) |
| LOC110487931 | LOC106570561 | coding | upstream | 398126 | 11815107 ~ 11841142 (+) |
| col8a2 | LOC106570550 | coding | downstream | 20961 | 12322871 ~ 12414149 (+) |
| LOC110487937 | LOC106588828 | coding | downstream | 123133 | 12425043 ~ 12472248 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 972310 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 1205678 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 1549065 | 13850975 ~ 14003434 (+) |
| G2297039 | NA | non-coding | upstream | 4129 | 12234505 ~ 12235139 (+) |
| G2296941 | NA | non-coding | upstream | 63189 | 12175506 ~ 12176079 (+) |
| G2296920 | NA | non-coding | upstream | 118813 | 12119372 ~ 12120455 (+) |
| G2296883 | NA | non-coding | upstream | 201783 | 12037284 ~ 12037485 (+) |
| G2296875 | NA | non-coding | upstream | 214693 | 12024325 ~ 12024575 (+) |
| G2297072 | NA | non-coding | downstream | 19600 | 12321510 ~ 12322066 (+) |
| G2297082 | NA | non-coding | downstream | 41126 | 12343036 ~ 12344731 (+) |
| G2297098 | NA | non-coding | downstream | 73265 | 12375175 ~ 12375740 (+) |
| G2297096 | NA | non-coding | downstream | 116032 | 12417942 ~ 12418209 (+) |
| G2297127 | NA | non-coding | downstream | 162128 | 12464038 ~ 12465088 (+) |
| G2296450 | NA | other | upstream | 321128 | 11915196 ~ 11977297 (+) |
| G2296278 | NA | other | upstream | 674678 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 948965 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 1717961 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 1328152 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 1451357 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1712322 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1905256 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 2001826 | 14303736 ~ 14304232 (+) |
