G2297072


Basic Information

Item Value
gene id G2297072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12321510 ~ 12322066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627789
CCTTCAGTAGGTATACTTCAGTAGGTATACTTCAGTAGATGTACTTCCGTAGGTGTACTTCAGTAGGTGTACTTCAGTAGATGTCCTTCAGTAGGTGTACTTCAGGAGATGTACTTCAGTAGATGTACTTCAGTAGATGTACTTCAGTAGATGTACTTCAGTAGGTGTACTTCAGGAGATGTCCTTCAGTAGGTGTACTTCAGTAGGTGTACTTCAGTAGATGTACTTCAGTAGATGTACTTCAGTAGGTGTCCTTCAGTAGGTGTACTTCAGTAGATGTACTTCAGTAGATGTACTTCAGTAGGTGTACTTCAGGAGATGTCCTTCAGTAGGTGTACTTCAGTAGATGTCCTTCAGTAGGTGTACTTCAGTAGGTGTCCTTCAGTAGGTGTACTTCAGTAGATGTACTTCAGTAGATGTACTTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576195 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627789 True 425 lncRNA 0.41 2 12321510 12322066

Neighbor

gene id symbol gene type direction distance location
LOC110487924 LOC106570549 coding upstream 167773 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 209049 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 362431 11931558 ~ 11959079 (+)
LOC110487932 LOC106570557 coding upstream 411879 11906205 ~ 11910366 (+)
LOC110487931 LOC106570561 coding upstream 480368 11815107 ~ 11841142 (+)
col8a2 LOC106570550 coding downstream 805 12322871 ~ 12414149 (+)
LOC110487937 LOC106588828 coding downstream 102977 12425043 ~ 12472248 (+)
LOC118946451 adgrb2 coding downstream 952154 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 1185522 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 1528909 13850975 ~ 14003434 (+)
G2297045 NA non-coding upstream 19600 12239268 ~ 12301910 (+)
G2297039 NA non-coding upstream 86371 12234505 ~ 12235139 (+)
G2296941 NA non-coding upstream 145431 12175506 ~ 12176079 (+)
G2296920 NA non-coding upstream 201055 12119372 ~ 12120455 (+)
G2296883 NA non-coding upstream 284025 12037284 ~ 12037485 (+)
G2297082 NA non-coding downstream 20970 12343036 ~ 12344731 (+)
G2297098 NA non-coding downstream 53109 12375175 ~ 12375740 (+)
G2297096 NA non-coding downstream 95876 12417942 ~ 12418209 (+)
G2297127 NA non-coding downstream 141972 12464038 ~ 12465088 (+)
G2297133 NA non-coding downstream 156918 12478984 ~ 12482894 (+)
G2296450 NA other upstream 403370 11915196 ~ 11977297 (+)
G2296278 NA other upstream 756920 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1031207 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1800203 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1307996 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1431201 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1692166 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1885100 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1981670 14303736 ~ 14304232 (+)

Expression


Co-expression Network