Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297247 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12345401 ~ 12346298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106562210, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2627984 | False | 417 | lncRNA | 0.43 | 2 | 12345401 | 12346298 |
| TU2627986 | True | 602 | lncRNA | 0.43 | 3 | 12345401 | 12346298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487923 | LOC106588825 | coding | downstream | 198718 | 12130756 ~ 12146683 (-) |
| LOC110487922 | LOC106570548 | coding | downstream | 220157 | 12119349 ~ 12125244 (-) |
| LOC110487933 | LOC106570558 | coding | downstream | 415509 | 11916968 ~ 11929892 (-) |
| LOC110487928 | LOC106590894 | coding | downstream | 533693 | 11765257 ~ 11811708 (-) |
| LOC110487921 | mrpl53 | coding | downstream | 796663 | 11545239 ~ 11548738 (-) |
| LOC110489382 | LOC106570512 | coding | upstream | 1656792 | 14003090 ~ 14039542 (-) |
| npvf | LOC106570543 | coding | upstream | 1698062 | 14044360 ~ 14049475 (-) |
| hoxa1a | hoxa1 | coding | upstream | 2065682 | 14411980 ~ 14415021 (-) |
| hoxa3a | hoxa3aa | coding | upstream | 2072320 | 14418618 ~ 14459316 (-) |
| hoxa4a | hoxa4ab | coding | upstream | 2095591 | 14441889 ~ 14445381 (-) |
| G2297241 | NA | non-coding | downstream | 15748 | 12328457 ~ 12329653 (-) |
| G2297197 | NA | non-coding | downstream | 43491 | 12239275 ~ 12301910 (-) |
| G2297199 | NA | non-coding | downstream | 101597 | 12241331 ~ 12243804 (-) |
| G2297035 | NA | non-coding | downstream | 118553 | 12226253 ~ 12226848 (-) |
| G2297034 | NA | non-coding | downstream | 120613 | 12224554 ~ 12224788 (-) |
| G2297260 | NA | non-coding | upstream | 23719 | 12370017 ~ 12373227 (-) |
| G2297305 | NA | non-coding | upstream | 100494 | 12446792 ~ 12447256 (-) |
| G2297273 | NA | non-coding | upstream | 108126 | 12454424 ~ 12472240 (-) |
| G2297317 | NA | non-coding | upstream | 139793 | 12486091 ~ 12486305 (-) |
| G2297335 | NA | non-coding | upstream | 169770 | 12516068 ~ 12516294 (-) |
| G2296582 | NA | other | downstream | 857021 | 11481605 ~ 11488380 (-) |
| LOC110487919 | LOC106570575 | other | downstream | 889496 | 11274255 ~ 11455993 (-) |
| G2295895 | NA | other | downstream | 1556842 | 10788107 ~ 10788559 (-) |
| LOC110489370 | clasp2 | other | downstream | 2135576 | 10205530 ~ 10316136 (-) |
| G2298681 | NA | other | upstream | 1304403 | 13650701 ~ 13651184 (-) |
| G2298700 | NA | other | upstream | 1356403 | 13702701 ~ 13702996 (-) |
| G2299075 | NA | other | upstream | 1717581 | 14063879 ~ 14067899 (-) |
| G2302281 | NA | other | upstream | 4924238 | 17270536 ~ 17271016 (-) |
| G2303058 | NA | other | upstream | 4978928 | 17325226 ~ 17326420 (-) |
