Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297133 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12478984 ~ 12482894 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2627858 | True | 303 | lncRNA | 0.33 | 2 | 12478984 | 12482894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 6736 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 64835 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 325247 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 366523 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 519905 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 791326 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 1024694 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 1368081 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 1662107 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1695425 | 14178319 ~ 14187277 (+) |
| G2297127 | NA | non-coding | upstream | 13896 | 12464038 ~ 12465088 (+) |
| G2297096 | NA | non-coding | upstream | 60775 | 12417942 ~ 12418209 (+) |
| G2297098 | NA | non-coding | upstream | 103244 | 12375175 ~ 12375740 (+) |
| G2297082 | NA | non-coding | upstream | 134253 | 12343036 ~ 12344731 (+) |
| G2297072 | NA | non-coding | upstream | 156918 | 12321510 ~ 12322066 (+) |
| G2297146 | NA | non-coding | downstream | 13126 | 12496020 ~ 12498578 (+) |
| G2297165 | NA | non-coding | downstream | 47596 | 12530490 ~ 12569590 (+) |
| G2297177 | NA | non-coding | downstream | 69796 | 12552690 ~ 12556516 (+) |
| G2297185 | NA | non-coding | downstream | 81264 | 12564158 ~ 12580049 (+) |
| G2297393 | NA | non-coding | downstream | 113935 | 12596829 ~ 12597065 (+) |
| G2296450 | NA | other | upstream | 560844 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 570318 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 914394 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1188681 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 1957677 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 1147168 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 1270373 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1531338 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1724272 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1820842 | 14303736 ~ 14304232 (+) |
