G2297146


Basic Information

Item Value
gene id G2297146
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12496020 ~ 12498578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2627871
ggtcagggcgtgagttgggttgggcagtctatgtttgtttttctatgatttgggtatttctatgtttccgcccagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctctgtgttttgcaccagatagggctgttttgggttttcacgtttcttgtttttgttagtttgttcatgtgaagtgatttattaaaacatgagtcaaaataaccacgctgcgctttggtccgcatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2627871 True 303 lncRNA 0.43 2 12496020 12498578

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 23772 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 81871 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 342283 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 383559 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 536941 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 775642 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 1009010 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 1352397 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1646423 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1679741 14178319 ~ 14187277 (+)
G2297133 NA non-coding upstream 13126 12478984 ~ 12482894 (+)
G2297127 NA non-coding upstream 30932 12464038 ~ 12465088 (+)
G2297096 NA non-coding upstream 77811 12417942 ~ 12418209 (+)
G2297098 NA non-coding upstream 120280 12375175 ~ 12375740 (+)
G2297082 NA non-coding upstream 151289 12343036 ~ 12344731 (+)
G2297165 NA non-coding downstream 31912 12530490 ~ 12569590 (+)
G2297177 NA non-coding downstream 54112 12552690 ~ 12556516 (+)
G2297185 NA non-coding downstream 65580 12564158 ~ 12580049 (+)
G2297393 NA non-coding downstream 98251 12596829 ~ 12597065 (+)
G2297430 NA non-coding downstream 122912 12621490 ~ 12621704 (+)
G2296450 NA other upstream 577880 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 587354 11906205 ~ 11910366 (+)
G2296278 NA other upstream 931430 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1205717 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 1974713 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1131484 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1254689 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1515654 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1708588 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1805158 14303736 ~ 14304232 (+)

Expression


Co-expression Network