G2297430


Basic Information

Item Value
gene id G2297430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12621490 ~ 12621704 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628185
ttctttatccctttgcacatgtgtgtatagggtagtagttgtggaattgttaggttagattactcgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataacatttgatttgatttgatttgtgacaTGTTGCCACAATAAAATGGcaaccagttaagaa

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628185 True 215 lncRNA 0.37 1 12621490 12621704

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 149242 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 207341 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 467753 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 509029 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 662411 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 652516 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 885884 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 1229271 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1523297 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1556615 14178319 ~ 14187277 (+)
G2297393 NA non-coding upstream 24425 12596829 ~ 12597065 (+)
G2297185 NA non-coding upstream 41441 12564158 ~ 12580049 (+)
G2297165 NA non-coding upstream 51900 12530490 ~ 12569590 (+)
G2297177 NA non-coding upstream 64974 12552690 ~ 12556516 (+)
G2297146 NA non-coding upstream 122912 12496020 ~ 12498578 (+)
G2297472 NA non-coding downstream 45672 12667376 ~ 12667953 (+)
G2297474 NA non-coding downstream 48665 12670369 ~ 12671333 (+)
G2297479 NA non-coding downstream 54973 12676677 ~ 12676883 (+)
G2297568 NA non-coding downstream 141448 12763152 ~ 12763366 (+)
G2297594 NA non-coding downstream 159347 12781051 ~ 12781254 (+)
G2296450 NA other upstream 703350 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 712824 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1056900 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1331187 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2100183 10509464 ~ 10521398 (+)
G2298390 NA other downstream 1008358 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1131563 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1392528 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1585462 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1682032 14303736 ~ 14304232 (+)

Expression


Co-expression Network