G2297474


Basic Information

Item Value
gene id G2297474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12670369 ~ 12671333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628234
agtttcaaagtattcatatcgtagctctgggttgttttgctgcttatgttttttgtttgacatttgtcttaggtgttttctaattgttttacattcattatcaaaccatttgtcagtaacattttgatttttgcttctgatgttgcattgctttggttttctcaaatttgctttcgatgctgctttttggaatatgcagttgatgttttgggtagctgaattgacaccatctttattgttttggtacagtgagttattgaaaaactgtatagagttcatcatttcatttgagttcaatgtttcaatgaatgcctctgcactgtttggagcccatctgaacaattggtttatgttgtaaagtttattgggctgtttttttgaatgaatattgccggttaatttcttcagaaacacgttgatctgactgtgatctgacaatggtgtctgtggtctgacagtgaatgcactaatggaggaggggtcaatgtcagtgatggcataatcgactacacttgtcccaagagctgagcagtaagtaaactgacctaaagagtcccctctgattctaccattaagcatgtacaggcctaaggctcgacagagatgtactaactcttttccatttttgttcagtatttggtcaggactgtttctattatttataatagggctactgtacaaggaggggtgtccaaatatgtggtggttacctcccgcatcagtgtagtcaggctcagaacctgttcttgcattgaaatctccacaaagaagcactttaccctgcgcctgaaatgtaatgatttctgtctggagattgtcaaaaaactgatcatcataatatgatgaatctgaaggaggagcataagctgcacatatgtatacatcattgtcacaatagattgtacctttgttaagttttagccaaatgtgagtggtaccttttttcatttcattcagtgctaagt

Function

NR:

description
PREDICTED: uncharacterized protein LOC109067500

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628234 True 965 lncRNA 0.38 1 12670369 12671333

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 198121 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 256220 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 516632 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 557908 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 711290 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 602887 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 836255 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 1179642 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1473668 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1506986 14178319 ~ 14187277 (+)
G2297472 NA non-coding upstream 2416 12667376 ~ 12667953 (+)
G2297430 NA non-coding upstream 48665 12621490 ~ 12621704 (+)
G2297393 NA non-coding upstream 73304 12596829 ~ 12597065 (+)
G2297185 NA non-coding upstream 90320 12564158 ~ 12580049 (+)
G2297165 NA non-coding upstream 100779 12530490 ~ 12569590 (+)
G2297479 NA non-coding downstream 5344 12676677 ~ 12676883 (+)
G2297568 NA non-coding downstream 91819 12763152 ~ 12763366 (+)
G2297594 NA non-coding downstream 109718 12781051 ~ 12781254 (+)
G2297608 NA non-coding downstream 121677 12793010 ~ 12793250 (+)
G2297623 NA non-coding downstream 132154 12803487 ~ 12803761 (+)
G2296450 NA other upstream 752229 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 761703 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1105779 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1380066 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2149062 10509464 ~ 10521398 (+)
G2298390 NA other downstream 958729 13630062 ~ 13630795 (+)
G2298739 NA other downstream 1081934 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1342899 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1535833 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1632403 14303736 ~ 14304232 (+)

Expression


Co-expression Network