Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297623 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12803487 ~ 12803761 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2628384 | True | 275 | lncRNA | 0.50 | 1 | 12803487 | 12803761 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 331239 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 389338 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 649750 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 691026 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 844408 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 470459 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 703827 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 1047214 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 1341240 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1374558 | 14178319 ~ 14187277 (+) |
| G2297608 | NA | non-coding | upstream | 10237 | 12793010 ~ 12793250 (+) |
| G2297594 | NA | non-coding | upstream | 22233 | 12781051 ~ 12781254 (+) |
| G2297568 | NA | non-coding | upstream | 40121 | 12763152 ~ 12763366 (+) |
| G2297479 | NA | non-coding | upstream | 126604 | 12676677 ~ 12676883 (+) |
| G2297474 | NA | non-coding | upstream | 132154 | 12670369 ~ 12671333 (+) |
| G2297627 | NA | non-coding | downstream | 1088 | 12804849 ~ 12805074 (+) |
| G2297636 | NA | non-coding | downstream | 9734 | 12813495 ~ 12813725 (+) |
| G2297710 | NA | non-coding | downstream | 63394 | 12867155 ~ 12867445 (+) |
| G2297733 | NA | non-coding | downstream | 75467 | 12879228 ~ 12879524 (+) |
| G2297755 | NA | non-coding | downstream | 95947 | 12899708 ~ 12899947 (+) |
| G2296450 | NA | other | upstream | 885347 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 894821 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 1238897 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1513184 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 2282180 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 826301 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 949506 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1210471 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1403405 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1499975 | 14303736 ~ 14304232 (+) |
