G2297636


Basic Information

Item Value
gene id G2297636
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12813495 ~ 12813725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628397
caactgacatttactcctgaggtgctgacttgttgcaccttCGTCCActattgtgattattattatttgaccatgctggtcatttatgagcatttgaacatcttggccatgttctgttataatctccacccgacgcagccagaagaggactggccacccctcatagcctggttcctctaggtttcttcctaggttttggcctttctattgagtttttcctagccactgtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628397 True 231 lncRNA 0.45 1 12813495 12813725

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 341247 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 399346 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 659758 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 701034 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 854416 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 460495 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 693863 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 1037250 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1331276 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1364594 14178319 ~ 14187277 (+)
G2297627 NA non-coding upstream 8421 12804849 ~ 12805074 (+)
G2297623 NA non-coding upstream 9734 12803487 ~ 12803761 (+)
G2297608 NA non-coding upstream 20245 12793010 ~ 12793250 (+)
G2297594 NA non-coding upstream 32241 12781051 ~ 12781254 (+)
G2297568 NA non-coding upstream 50129 12763152 ~ 12763366 (+)
G2297710 NA non-coding downstream 53430 12867155 ~ 12867445 (+)
G2297733 NA non-coding downstream 65503 12879228 ~ 12879524 (+)
G2297755 NA non-coding downstream 85983 12899708 ~ 12899947 (+)
G2297769 NA non-coding downstream 102412 12916137 ~ 12916352 (+)
G2297780 NA non-coding downstream 111134 12924859 ~ 12925064 (+)
G2296450 NA other upstream 895355 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 904829 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1248905 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1523192 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2292188 10509464 ~ 10521398 (+)
G2298390 NA other downstream 816337 13630062 ~ 13630795 (+)
G2298739 NA other downstream 939542 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1200507 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1393441 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1490011 14303736 ~ 14304232 (+)

Expression


Co-expression Network