G2297755


Basic Information

Item Value
gene id G2297755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12899708 ~ 12899947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628522
ctcacatcgccttagattttgtcaccggactgccttcgtcagcggggaagactgttattcttacggttgtcgataggttctctaaggcggctcatttcattccccttgctaagcttccttctgctaaagagacggcacaaatcatcatagagaatgttttcagaattcatggccttccgtcagacgtcgtttcggacagaggtccgcaattcacgtctcaattttggagggagttttgcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628522 True 240 lncRNA 0.48 1 12899708 12899947

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 427460 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 485559 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 745971 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 787247 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 940629 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 374273 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 607641 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 951028 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1245054 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1278372 14178319 ~ 14187277 (+)
G2297733 NA non-coding upstream 20184 12879228 ~ 12879524 (+)
G2297710 NA non-coding upstream 32263 12867155 ~ 12867445 (+)
G2297636 NA non-coding upstream 85983 12813495 ~ 12813725 (+)
G2297627 NA non-coding upstream 94634 12804849 ~ 12805074 (+)
G2297623 NA non-coding upstream 95947 12803487 ~ 12803761 (+)
G2297769 NA non-coding downstream 16190 12916137 ~ 12916352 (+)
G2297780 NA non-coding downstream 24912 12924859 ~ 12925064 (+)
G2297790 NA non-coding downstream 32364 12932311 ~ 12932530 (+)
G2297793 NA non-coding downstream 34068 12934015 ~ 12934288 (+)
G2297797 NA non-coding downstream 38258 12938205 ~ 12938464 (+)
G2296450 NA other upstream 981568 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 991042 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1335118 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1609405 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2378401 10509464 ~ 10521398 (+)
G2298390 NA other downstream 730115 13630062 ~ 13630795 (+)
G2298739 NA other downstream 853320 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1114285 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1307219 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1403789 14303736 ~ 14304232 (+)

Expression


Co-expression Network