G2297790


Basic Information

Item Value
gene id G2297790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 12932311 ~ 12932530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2628557
gagagagagagagagagagagagagagagagagagagagagttgggctgaagagagagagagagagagatcagctagagagagagagagagagagttgggctggaaagagagagagagagatagttgggctggagagagacagagagagagagagagagacagagagaaagagagagagggatagttgggctggagagagagggatagttgggctggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2628557 True 220 lncRNA 0.51 1 12932311 12932530

Neighbor

gene id symbol gene type direction distance location
LOC110487937 LOC106588828 coding upstream 460063 12425043 ~ 12472248 (+)
col8a2 LOC106570550 coding upstream 518162 12322871 ~ 12414149 (+)
LOC110487924 LOC106570549 coding upstream 778574 12146678 ~ 12153737 (+)
LOC110489380 LOC106570560 coding upstream 819850 11983291 ~ 12112461 (+)
LOC110487934 LOC106570559 coding upstream 973232 11931558 ~ 11959079 (+)
LOC118946451 adgrb2 coding downstream 341690 13274220 ~ 13491588 (+)
LOC110487938 adgrb2 coding downstream 575058 13507588 ~ 13724989 (+)
LOC110487940 LOC106588839 coding downstream 918445 13850975 ~ 14003434 (+)
LOC110487944 LOC106570514 coding downstream 1212471 14145001 ~ 14175807 (+)
LOC110487945 cbx3 coding downstream 1245789 14178319 ~ 14187277 (+)
G2297780 NA non-coding upstream 7247 12924859 ~ 12925064 (+)
G2297769 NA non-coding upstream 15959 12916137 ~ 12916352 (+)
G2297755 NA non-coding upstream 32364 12899708 ~ 12899947 (+)
G2297733 NA non-coding upstream 52787 12879228 ~ 12879524 (+)
G2297710 NA non-coding upstream 64866 12867155 ~ 12867445 (+)
G2297793 NA non-coding downstream 1485 12934015 ~ 12934288 (+)
G2297797 NA non-coding downstream 5675 12938205 ~ 12938464 (+)
G2297832 LOC100194703 non-coding downstream 35399 12967929 ~ 12968181 (+)
G2297851 NA non-coding downstream 48665 12981195 ~ 12981404 (+)
G2297878 NA non-coding downstream 68000 13000530 ~ 13000767 (+)
G2296450 NA other upstream 1014171 11915196 ~ 11977297 (+)
LOC110487932 LOC106570557 other upstream 1023645 11906205 ~ 11910366 (+)
G2296278 NA other upstream 1367721 11563547 ~ 11564590 (+)
G2296150 LOC106570575 other upstream 1642008 11285493 ~ 11290303 (+)
LOC110487904 snrpd1 other upstream 2411004 10509464 ~ 10521398 (+)
G2298390 NA other downstream 697532 13630062 ~ 13630795 (+)
G2298739 NA other downstream 820737 13753267 ~ 13753517 (+)
G2298884 NA other downstream 1081702 14014232 ~ 14015587 (+)
LOC118936620 LOC106570515 other downstream 1274636 14207166 ~ 14225549 (+)
G2299191 NA other downstream 1371206 14303736 ~ 14304232 (+)

Expression


Co-expression Network