Gene
RNA
| Item | Value |
|---|---|
| gene id | G2297793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 12934015 ~ 12934288 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2628560 | True | 274 | lncRNA | 0.49 | 1 | 12934015 | 12934288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487937 | LOC106588828 | coding | upstream | 461767 | 12425043 ~ 12472248 (+) |
| col8a2 | LOC106570550 | coding | upstream | 519866 | 12322871 ~ 12414149 (+) |
| LOC110487924 | LOC106570549 | coding | upstream | 780278 | 12146678 ~ 12153737 (+) |
| LOC110489380 | LOC106570560 | coding | upstream | 821554 | 11983291 ~ 12112461 (+) |
| LOC110487934 | LOC106570559 | coding | upstream | 974936 | 11931558 ~ 11959079 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 339932 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 573300 | 13507588 ~ 13724989 (+) |
| LOC110487940 | LOC106588839 | coding | downstream | 916687 | 13850975 ~ 14003434 (+) |
| LOC110487944 | LOC106570514 | coding | downstream | 1210713 | 14145001 ~ 14175807 (+) |
| LOC110487945 | cbx3 | coding | downstream | 1244031 | 14178319 ~ 14187277 (+) |
| G2297790 | NA | non-coding | upstream | 1485 | 12932311 ~ 12932530 (+) |
| G2297780 | NA | non-coding | upstream | 8951 | 12924859 ~ 12925064 (+) |
| G2297769 | NA | non-coding | upstream | 17663 | 12916137 ~ 12916352 (+) |
| G2297755 | NA | non-coding | upstream | 34068 | 12899708 ~ 12899947 (+) |
| G2297733 | NA | non-coding | upstream | 54491 | 12879228 ~ 12879524 (+) |
| G2297797 | NA | non-coding | downstream | 3917 | 12938205 ~ 12938464 (+) |
| G2297832 | LOC100194703 | non-coding | downstream | 33641 | 12967929 ~ 12968181 (+) |
| G2297851 | NA | non-coding | downstream | 46907 | 12981195 ~ 12981404 (+) |
| G2297878 | NA | non-coding | downstream | 66242 | 13000530 ~ 13000767 (+) |
| G2297879 | NA | non-coding | downstream | 68766 | 13003054 ~ 13003886 (+) |
| G2296450 | NA | other | upstream | 1015875 | 11915196 ~ 11977297 (+) |
| LOC110487932 | LOC106570557 | other | upstream | 1025349 | 11906205 ~ 11910366 (+) |
| G2296278 | NA | other | upstream | 1369425 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 1643712 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 2412708 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 695774 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 818979 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1079944 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 1272878 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 1369448 | 14303736 ~ 14304232 (+) |
